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BaseInfo

ncRNA ID novel_gma_miR2624
Species Glycine max
Class miRNA
Genome position Chr1:38460082-38460157 [+]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 21
Mature sequence(if miRNA) 1 - UUAACAUCGGUUUUUAUAGAA - 21
Stem-loop(if miRNA) --UUA               G    A          GU
     ACAUCGGUUUUUAUA AAAA CGAUGUUAAU  A
     ||||||||||||||| |||| ||||||||||
     UGUAGCCAAAAAUAU UUUU GCUACAAUUG  U
UCAAC               G    G          AA
Stem-loop sequence UUAACAUCGGUUUUUAUAGAAAAACGAUGUUAAUGUAUAAGUUAACAUCGGUUUUGUAUAAAAACCGAUGUCAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006594495.2
ncRNA:21   AAGAUAUUUUUGGCUACAAUU   1
  **|*|||||||||||||||=|
targets:1346   CGCAAUAAAAACCGAUGUUGA   1366

2.5 PREDICTED: Glycine max protein CHUP1, chloroplastic-like (LOC100814896), mRNA protein CHUP1, chloroplastic-like(LOC100814896) coding protein psRNATarget