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BaseInfo

ncRNA ID novel_gma_miR2623
Species Glycine max
Class miRNA
Genome position Chr16:31889320-31889424 [+]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 20
Mature sequence(if miRNA) 1 - GGUAAUGAUGUGGAGAUUGU - 20
Stem-loop(if miRNA) -G      A   GG     G         CAAU   GA    GUUG UG   G  A
  GUAAUG UGU  AGAUU UGAGGAUGG    GAU  CGUU    U  CCG UG C
  |||||| |||  ||||| |||||||||    |||  ||||    |  ||| ||
  CGUUAC ACA  UCUAG GUUUCUACU    CUA  GUAA    G  GGU AU A
AA      -   AG     -         ----   GG    --GA GU   G  U
Stem-loop sequence GGUAAUGAUGUGGAGAUUGUGAGGAUGGCAAUGAUGACGUUGUUGUUGCCGGUGACAUUAGUGGUGGAGAAUGGGAUCUCAUCUUUGGAUCUGAACACAUUGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770972.1
ncRNA:20   UGUUAGAGGUGUAGUAAUGG   1
  **||||*|||||||||||||
targets:243   UGAAUCACCACAUCAUUACC   262

2.0 PREDICTED: Glycine max uncharacterized LOC106797151 (LOC106797151), mRNA uncharacterized LOC106797151(LOC106797151) coding protein psRNATarget
XM_003540225.3
ncRNA:20   UGUUAGAGGUGUAGUAAUGG   1
  ||||**|||||||||||||*
targets:1022   ACAACAUCCACAUCAUUACA   1041

3.0 PREDICTED: Glycine max cellulose synthase-like protein H1 (LOC100779739), mRNA cellulose synthase-like protein H1(LOC100779739) coding protein psRNATarget