ncRNA ID | novel_gma_miR2623 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:31889320-31889424 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451660 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GGUAAUGAUGUGGAGAUUGU - 20 |
Stem-loop(if miRNA) |
-G      A   GG     G         CAAU   GA    GUUG UG   G  A   GUAAUG UGU  AGAUU UGAGGAUGG    GAU  CGUU    U  CCG UG C   |||||| |||  ||||| |||||||||    |||  ||||    |  ||| ||   CGUUAC ACA  UCUAG GUUUCUACU    CUA  GUAA    G  GGU AU A AA      -   AG     -         ----   GG    --GA GU   G  U |
Stem-loop sequence | GGUAAUGAUGUGGAGAUUGUGAGGAUGGCAAUGAUGACGUUGUUGUUGCCGGUGACAUUAGUGGUGGAGAAUGGGAUCUCAUCUUUGGAUCUGAACACAUUGCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014770972.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC106797151 (LOC106797151), mRNA | uncharacterized LOC106797151(LOC106797151) | coding protein | psRNATarget | |||||||||
XM_003540225.3 |
|
3.0 | PREDICTED: Glycine max cellulose synthase-like protein H1 (LOC100779739), mRNA | cellulose synthase-like protein H1(LOC100779739) | coding protein | psRNATarget |