Search result

BaseInfo

ncRNA ID novel_gma_miR2619
Species Glycine max
Class miRNA
Genome position Chr15:45909707-45909751 [+]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 21
Mature sequence(if miRNA) 25 - UAACGACAUCGGUUUUCAAGU - 45
Stem-loop(if miRNA) --         A       AAG
  UUGAAAACC AUGUUGU   U
  ||||||||| |||||||   G
  AACUUUUGG UACAGCA   C
UG         C       AUU
Stem-loop sequence UUGAAAACCAAUGUUGUAAGUGCUUAACGACAUCGGUUUUCAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765729.1
ncRNA:21   UGAACUUUUGGCUACAGCAAU   1
  =||||||||||||||||*||=
targets:1725   GCUUGAAAACCGAUGUCAUUG   1745

2.5 PREDICTED: Glycine max rho GTPase-activating protein 5-like (LOC100812401), mRNA rho GTPase-activating protein 5-like(LOC100812401) coding protein psRNATarget
XM_014764817.1
ncRNA:21   UGAACUUUUGGCUACAGCAAU   1
  *=|||||||||||||||||*=
targets:3   UUUUGAAAACCGAUGUCGUGG   23

2.5 PREDICTED: Glycine max uncharacterized LOC102659453 (LOC102659453), mRNA uncharacterized LOC102659453(LOC102659453) coding protein psRNATarget
XM_014776578.1
ncRNA:21   UGAACUUUUGGCUACAGCAAU   1
  |=*||||||||*|||||||||
targets:1602   AUCUGAAAACCAAUGUCGUUA   1622

2.5 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget