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BaseInfo

ncRNA ID novel_gma_miR2615
Species Glycine max
Class miRNA
Genome position Chr15:26507627-26507702 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 24
Mature sequence(if miRNA) 1 - AAGGUAAAAUUGUAUUUUUGGUCU - 24
Stem-loop(if miRNA) ---A      A UG A  G      UAUAU        A
    CAAAAA A  G UU AUUUUC     UAAAUCAU A
    |||||| |  | || ||||||     ||||||||
    GUUUUU U  U AA UGGAAG     AUUUAGUG U
UCUG      A GU A  A      -UUUU        G
Stem-loop sequence ACAAAAAAAUGGAUUGAUUUUCUAUAUUAAAUCAUAAUGGUGAUUUAUUUUGAAGGUAAAAUUGUAUUUUUGGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776582.1
ncRNA:24   UCUGGUUUUUAUGUUAAAAUGGAA   1
  =||||||||||||||||||||||*
targets:1740   GGACCAAAAAUACAAUUUUACCUA   1763

1.0 PREDICTED: Glycine max uncharacterized protein SYNPCC7002_A1590-like (LOC100797206), transcript variant X2, mRNA uncharacterized protein SYNPCC7002_A1590-like(LOC100797206) coding protein psRNATarget
XM_006602607.2
ncRNA:24   UCU-GGUUUUUAUGUUAAAAUGGAA   1
  |||-==*||||||||||||||||||
targets:825   AGAAUUCAAAAUACAAUUUUACCUU   849

1.0 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget
XM_006583894.2
ncRNA:24   UCUGGUUUUUAUGUUAAAAUGGAA   1
  =||||||||=|||||||||||||*
targets:2479   GGACCAAAAGUACAAUUUUACCUA   2502

2.0 PREDICTED: Glycine max probable WRKY transcription factor 3 (LOC100802109), mRNA probable WRKY transcription factor 3(LOC100802109) coding protein psRNATarget