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BaseInfo

ncRNA ID novel_gma_miR2599
Species Glycine max
Class miRNA
Genome position Chr10:25725600-25725659 [-]
Reference genome Glycine_max_v2.0
Source SRR1294484;SRR2045231;SRR1295519;SRR1295521;SRR1292929
Length 24
Mature sequence(if miRNA) 1 - ACCGUCUUUGAAUGUUGAACCAGA - 24
Stem-loop(if miRNA) --  U    CCG                  A
  UG UUCA   UAUUCAAAGACGGUUAUU C
  || ||||   ||||||||||||||||||
  AC AAGU   GUAAGUUUCUGCCAAUAA A
AG  C    --U                  U
Stem-loop sequence UGUUUCACCGUAUUCAAAGACGGUUAUUACAUAAUAACCGUCUUUGAAUGUUGAACCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   AGACCAAGUUGUAAGUUUCUGCCA   1
  ***|***|||||||||||||||||
targets:1534   GAAGAAGCAACAUUCAAAGACGGU   1557

2.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   AGACCAAGUUGUAAGUUUCUGCCA   1
  ***|***=||||||||||||||||
targets:1479   GAAGACAUAACAUUCAAAGACGGU   1502

3.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget