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BaseInfo

ncRNA ID novel_gma_miR2598
Species Glycine max
Class miRNA
Genome position Chr11:22403071-22403228 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 24
Mature sequence(if miRNA) 135 - AUUAACAUCGGUUAUUUGAAAACU - 158
Stem-loop(if miRNA) --A                   AA       C  U   CA    - AAC                  C           UG
   UUAACAUCGGUUAUUUGAA  CUGAUGU GU AAG  CUUA C   AUCAAUUUUCAAAUAACC GAUGUUAAAAU  A
   |||||||||||||||||||  ||||||| || |||  |||| |   |||||||||||||||||| |||||||||||
   AAUUGUAGCCAAUAAACUU  GGCUACA CA UUC  GAAU G   UAGUUAAAAGUUUAUUGG CUAUAAUUUUA  A
UAA                   -C       A  -   AC    U CUA                  -           UU
Stem-loop sequence AUUAACAUCGGUUAUUUGAAAACUGAUGUCGUUAAGCACUUACAACAUCAAUUUUCAAAUAACCCGAUGUUAAAAUUGAAUUAUUUUAAUAUCGGUUAUUUGAAAAUUGAUAUCGUUAAGCACUUACAACAUCGGCUUCAAAUAACCGAUGUUAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776578.1
ncRNA:24   UCAAAAGUUUAUUGGCUACAAUUA   1
  |||||||||||||||*|||||||*
targets:1638   AGUUUUCAAAUAACCAAUGUUAAC   1661

2.5 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget