ncRNA ID | novel_gma_miR2598 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:22403071-22403228 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451660 |
Length | 24 |
Mature sequence(if miRNA) | 135 - AUUAACAUCGGUUAUUUGAAAACU - 158 |
Stem-loop(if miRNA) |
--A                   AA       C  U   CA    - AAC                  C           UG    UUAACAUCGGUUAUUUGAA  CUGAUGU GU AAG  CUUA C   AUCAAUUUUCAAAUAACC GAUGUUAAAAU  A    |||||||||||||||||||  ||||||| || |||  |||| |   |||||||||||||||||| |||||||||||    AAUUGUAGCCAAUAAACUU  GGCUACA CA UUC  GAAU G   UAGUUAAAAGUUUAUUGG CUAUAAUUUUA  A UAA                   -C       A  -   AC    U CUA                  -           UU |
Stem-loop sequence | AUUAACAUCGGUUAUUUGAAAACUGAUGUCGUUAAGCACUUACAACAUCAAUUUUCAAAUAACCCGAUGUUAAAAUUGAAUUAUUUUAAUAUCGGUUAUUUGAAAAUUGAUAUCGUUAAGCACUUACAACAUCGGCUUCAAAUAACCGAUGUUAAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776578.1 |
|
2.5 | PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA | ankyrin repeat and SOCS box protein 7-like(LOC100786031) | coding protein | psRNATarget |