ncRNA ID | novel_gma_miR2597 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:16907441-16907512 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451660 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UAAGGCUUGAGCUUGACUCAUU - 22 |
Stem-loop(if miRNA) |
--    A     -          ----UA            UGAG CAAGC CAAGCUUUAC      GAUUUGAGCU   |||| ||||| ||||||||||      |||||||||C   ACUC GUUCG GUUCGGAAUG      UUGAAUUCGG UU    A     A          CAUAAG          |
Stem-loop sequence | UGAGACAAGCCAAGCUUUACUAGAUUUGAGCUCGGCUUAAGUUGAAUACGUAAGGCUUGAGCUUGACUCAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003521124.3 |
|
2.0 | PREDICTED: Glycine max ABC transporter A family member 1 (LOC100803263), transcript variant X2, mRNA | ABC transporter A family member 1(LOC100803263) | coding protein | psRNATarget | |||||||||
XM_006576752.2 |
|
2.0 | PREDICTED: Glycine max ABC transporter A family member 1 (LOC100803263), transcript variant X1, mRNA | ABC transporter A family member 1(LOC100803263) | coding protein | psRNATarget |