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BaseInfo

ncRNA ID novel_gma_miR2597
Species Glycine max
Class miRNA
Genome position Chr1:16907441-16907512 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 22
Mature sequence(if miRNA) 1 - UAAGGCUUGAGCUUGACUCAUU - 22
Stem-loop(if miRNA) --    A     -          ----UA         
  UGAG CAAGC CAAGCUUUAC      GAUUUGAGCU
  |||| ||||| ||||||||||      |||||||||C
  ACUC GUUCG GUUCGGAAUG      UUGAAUUCGG
UU    A     A          CAUAAG         
Stem-loop sequence UGAGACAAGCCAAGCUUUACUAGAUUUGAGCUCGGCUUAAGUUGAAUACGUAAGGCUUGAGCUUGACUCAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003521124.3
ncRNA:22   UUACUCAGUUCGAGUUCGGAAU   1
  *||||*|*||||||||||||||
targets:5188   CAUGAAUGAAGCUCAAGCCUUA   5209

2.0 PREDICTED: Glycine max ABC transporter A family member 1 (LOC100803263), transcript variant X2, mRNA ABC transporter A family member 1(LOC100803263) coding protein psRNATarget
XM_006576752.2
ncRNA:22   UUACUCAGUUCGAGUUCGGAAU   1
  *||||*|*||||||||||||||
targets:5196   CAUGAAUGAAGCUCAAGCCUUA   5217

2.0 PREDICTED: Glycine max ABC transporter A family member 1 (LOC100803263), transcript variant X1, mRNA ABC transporter A family member 1(LOC100803263) coding protein psRNATarget