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BaseInfo

ncRNA ID novel_gma_miR2596
Species Glycine max
Class miRNA
Genome position Chr11:30269548-30269643 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660;SRR1451662
Length 24
Mature sequence(if miRNA) 1 - CAUGAAAUGGACAGCUCAUAAUGC - 24
Stem-loop(if miRNA) --           C    C      A         CACGUCUCUAAAA
  AUUAUGAGUUG CCAU UCAUGU AGUUUUGCA             U
  ||||||||||| |||| |||||| |||||||||
  UAAUACUCGAC GGUA AGUACA UCAAAACGU             U
CG           A    A      G         CCACUCUGUAAAU
Stem-loop sequence AUUAUGAGUUGCCCAUCUCAUGUAAGUUUUGCACACGUCUCUAAAAUUUAAAUGUCUCACCUGCAAAACUGACAUGAAAUGGACAGCUCAUAAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544475.3
ncRNA:24   CGUAAUACUCGACAGGUAAAGUAC   1
  |=||-|||||*||||*||||||||
targets:1641   GUAU-AUGAGAUGUCAAUUUCAUG   1663

2.5 PREDICTED: Glycine max uncharacterized LOC100814552 (LOC100814552), mRNA uncharacterized LOC100814552(LOC100814552) coding protein psRNATarget