Search result

BaseInfo

ncRNA ID novel_gma_miR2595
Species Glycine max
Class miRNA
Genome position Chr1:26647168-26647243 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660;SRR1451664
Length 22
Mature sequence(if miRNA) 1 - CGCGGAAGAUCCUGCAGAACCU - 22
Stem-loop(if miRNA) --        A           UCA   U        AC
  GUUCUGCA GAUCUUUCGCG   UCC GCGGAAGA  C
  |||||||| |||||||||||   ||| ||||||||
  CAAGACGU CUAGAAGGCGC   AGG CGCCUUCU  U
UC        C           -CC   -        GU
Stem-loop sequence GUUCUGCAAGAUCUUUCGCGUCAUCCUGCGGAAGAACCUUGUCUUCCGCGGACCCGCGGAAGAUCCUGCAGAACCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574210.1
ncRNA:22   UCCAAGACGUCCUAGAAGGCGC   1
  ||*|||||||||||||||||||
targets:172   AGCUUCUGCAGGAUCUUCCGCG   193

0.0 PREDICTED: Glycine max uncharacterized LOC102668039 (LOC102668039), mRNA uncharacterized LOC102668039(LOC102668039) coding protein psRNATarget
XM_006575771.1
ncRNA:22   UCCAAGACGUCCUAGAAGGCGC   1
  ||*|||||||||||||||||||
targets:47   AGAUUCUGCAGGAUCUUCCGCG   68

0.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102663234), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102663234) coding protein psRNATarget
XM_014764743.1
ncRNA:22   UCCAAGACGUCCUAGAAGGCGC   1
  ||||||||||||||||||||=|
targets:134   AGGUUCUGCAGGAUCUUCCGUG   155

1.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102664703), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102664703) coding protein psRNATarget
XM_014764743.1
ncRNA:22   UCCAAGACGUCCUAGAAGGCGC   1
  ||*|||||=||||||||||*||
targets:97   AGCUUCUGUAGGAUCUUCCACG   118

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102664703), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102664703) coding protein psRNATarget
XM_014774095.1
ncRNA:22   UCCAAGACGUCCUAGAAGGCGC   1
  |||||||||||||||||||*|*
targets:84   AGGUUCUGCAGGAUCUUCCCCA   105

2.5 PREDICTED: Glycine max uncharacterized LOC102669294 (LOC102669294), mRNA uncharacterized LOC102669294(LOC102669294) coding protein psRNATarget