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BaseInfo

ncRNA ID novel_gma_miR2594
Species Glycine max
Class miRNA
Genome position Chr1:28816449-28816573 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660;SRR1292925;SRR1451610;SRR1451617
Length 22
Mature sequence(if miRNA) 1 - CAGGUAGAGAGUUUGAGGUGCC - 22
Stem-loop(if miRNA) CCA    -   UC    U    U   --UCG    ----CC   --   GG    UCC        U
   GCCU AGA  CUUU CCUG ACU     ACCU      UCU  CAG  AGGC   UGAUGCCU A
   |||| |||  |||| |||| |||     ||||      |||  |||  ||||   ||||||||
   UGGA UUU  GAGA GGAC UGA     UGGG      AGA  GUC  UUCG   AUUACGGA G
CCG    G   GA    U    -   UGGAA    CACUUA   AU   UU    -CC        G
Stem-loop sequence CCAGCCUAGAUCCUUUUCCUGUACUUCGACCUCCUCUCAGGGAGGCUCCUGAUGCCUUAGGAGGCAUUACCGCUUUUCUGUAAGAAUUCACGGGUAAGGUAGUCAGGUAGAGAGUUUGAGGUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT097802.1
ncRNA:22   CCGUGGAGUUUGAGAGAUGGAC   1
  |**|||||||||||||*||||*
targets:491   GUGACCUCAAACUCUCCACCUU   512

2.5 Soybean clone JCVI-FLGm-26K22 unknown mRNA NA coding protein psRNATarget