ncRNA ID | novel_gma_miR2592 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:36863571-36863724 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451660 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAACAAUCAACUUGAUCCGCAACU - 24 |
Stem-loop(if miRNA) |
--C                 A       UUACGAA    G               U         A G           G    UGCGGAUCAAGUUGAUU UUACGGA       UCAA UUGAUCCGCAGAAGA UUGCGGAUC A UUGAUCCGUAA C    ||||||||||||||||| |||||||       |||| ||||||||||||||| ||||||||| | ||||||||||| C    ACGCCUAGUUCAACUAA AAUGCCU       AGUU AACUAGGCGUUUUCU AAUGCCUAG U AACUAGGCGUU U UCA                 C       -------    G               U         C G           G |
Stem-loop sequence | CUGCGGAUCAAGUUGAUUAUUACGGAUUACGAAUCAAGUUGAUCCGCAGAAGAUUUGCGGAUCAAGUUGAUCCGUAAGCCUGUUGCGGAUCAAGUCGAUCCGUAAUUCUUUUGCGGAUCAAGUUGAUCCGUAACAAUCAACUUGAUCCGCAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768353.1 |
|
1.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |