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BaseInfo

ncRNA ID novel_gma_miR2592
Species Glycine max
Class miRNA
Genome position Chr1:36863571-36863724 [-]
Reference genome Glycine_max_v2.0
Source SRR1451660
Length 24
Mature sequence(if miRNA) 1 - UAACAAUCAACUUGAUCCGCAACU - 24
Stem-loop(if miRNA) --C                 A       UUACGAA    G               U         A G           G
   UGCGGAUCAAGUUGAUU UUACGGA       UCAA UUGAUCCGCAGAAGA UUGCGGAUC A UUGAUCCGUAA C
   ||||||||||||||||| |||||||       |||| ||||||||||||||| ||||||||| | ||||||||||| C
   ACGCCUAGUUCAACUAA AAUGCCU       AGUU AACUAGGCGUUUUCU AAUGCCUAG U AACUAGGCGUU U
UCA                 C       -------    G               U         C G           G
Stem-loop sequence CUGCGGAUCAAGUUGAUUAUUACGGAUUACGAAUCAAGUUGAUCCGCAGAAGAUUUGCGGAUCAAGUUGAUCCGUAAGCCUGUUGCGGAUCAAGUCGAUCCGUAAUUCUUUUGCGGAUCAAGUUGAUCCGUAACAAUCAACUUGAUCCGCAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768353.1
ncRNA:24   UCAACGCCUAGUUCAACUAACAAU   1
  ||*|||*|||||||||||||||||
targets:545   AGCUGCAGAUCAAGUUGAUUGUUA   568

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget