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BaseInfo

ncRNA ID novel_gma_miR2589
Species Glycine max
Class miRNA
Genome position Chr8:13721107-13721239 [-]
Reference genome Glycine_max_v2.0
Source SRR1451658
Length 24
Mature sequence(if miRNA) 110 - AACAUAUGAUUAAGGAUACUUUAG - 133
Stem-loop(if miRNA) --    UA  A        AC     AAAAUAG      UUUUAUGAAAUC         A   A  AAAU
  AACA  UG UUAAGGAU  UUUAG       UUCUUU            AAGAAAAUU GGU CU    U
  ||||  || ||||||||  |||||       ||||||            ||||||||| ||| ||    A
  UUGU  AC AGUUCUUA  AAAUC       AAGAAA            UUUUUUUGA CCA GG    A
AU    GC  A        GU     GUAAAAA      ----------UU         A   A  AACA
Stem-loop sequence AACAUAUGAUUAAGGAUACUUUAGAAAAUAGUUCUUUUUUUAUGAAAUCAAGAAAAUUAGGUACUAAAUUAAACAAGGAACCAAGUUUUUUUUUAAAGAAAAAAAUGCUAAAUGAUUCUUGAACACGUGUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573357.2
ncRNA:24   GAUUUCAUAGGAAUUAGUAUACAA   1
  **|||||||*||||||*|||||||
targets:1422   GAAAAGUAUGCUUAAUGAUAUGUU   1445

2.5 PREDICTED: Glycine max methionine aminopeptidase 1A-like (LOC100785022), transcript variant X3, mRNA methionine aminopeptidase 1A-like(LOC100785022) coding protein psRNATarget
XM_003516984.3
ncRNA:24   GAUUUCAUAGGAAUUAGUAUACAA   1
  **|||||||*||||||*|||||||
targets:1429   GAAAAGUAUGCUUAAUGAUAUGUU   1452

2.5 PREDICTED: Glycine max methionine aminopeptidase 1A-like (LOC100785022), transcript variant X1, mRNA methionine aminopeptidase 1A-like(LOC100785022) coding protein psRNATarget