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BaseInfo

ncRNA ID novel_gma_miR2584
Species Glycine max
Class miRNA
Genome position Chr6:48348371-48348516 [+]
Reference genome Glycine_max_v2.0
Source SRR1451658
Length 23
Mature sequence(if miRNA) 1 - AAGCUAACACCAAGAUGACGACU - 23
Stem-loop(if miRNA) ---AA     C   AA  U     --CU        -----  CC     UG   CAA        CAU   UCUCACUA
     GCUAA ACC  GA GACGA    AAUAACAC     UC  CUUGA  AUC   GUUACUUU   AGG        A
     ||||| |||  || |||||    ||||||||     ||  |||||  |||   ||||||||   |||        A
     UGAUU UGG  CU UUGUU    UUAUUGUG     AG  GAACU  UAG   UAGUGAAA   UCU        A
CCUUC     -   --  U     UCAC        AAUAA  AA     --   -AG        -AU   UCUAAAAA
Stem-loop sequence AAGCUAACACCAAGAUGACGACUAAUAACACUCCCCUUGAUGAUCCAAGUUACUUUCAUAGGUCUCACUAAAAAAAAAUCUUCUUAAAAGUGAUGAGAUUCAAGAAGAAAUAAGUGUUAUUCACUUUGUUUUCGGUUUAGUCUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006598025.2
ncRNA:23   UCAGCAGUAGAACCACAAUCGAA   1
  |*|=*||||=|||||||||||||
targets:3603   AAUUUUCAUUUUGGUGUUAGCUU   3625

2.0 PREDICTED: Glycine max uncharacterized LOC100780877 (LOC100780877), transcript variant X1, mRNA uncharacterized LOC100780877(LOC100780877) coding protein psRNATarget
XM_006598026.2
ncRNA:23   UCAGCAGUAGAACCACAAUCGAA   1
  |*|=*||||=|||||||||||||
targets:3618   AAUUUUCAUUUUGGUGUUAGCUU   3640

2.0 PREDICTED: Glycine max uncharacterized LOC100780877 (LOC100780877), transcript variant X2, mRNA uncharacterized LOC100780877(LOC100780877) coding protein psRNATarget
XM_006594307.2
ncRNA:23   UCAGCAGUAGAACCACAAUCGAA   1
  |*|=*||||=|||||||||||||
targets:3632   AUUUUUCAUUUUGGUGUUAGCUU   3654

2.0 PREDICTED: Glycine max uncharacterized LOC100813299 (LOC100813299), transcript variant X1, mRNA uncharacterized LOC100813299(LOC100813299) coding protein psRNATarget
XM_014765673.1
ncRNA:23   UCAGCAGUAGAACCACAAUCGAA   1
  |*|=*||||=|||||||||||||
targets:3650   AUUUUUCAUUUUGGUGUUAGCUU   3672

2.0 PREDICTED: Glycine max uncharacterized LOC100813299 (LOC100813299), transcript variant X2, mRNA uncharacterized LOC100813299(LOC100813299) coding protein psRNATarget