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BaseInfo

ncRNA ID novel_gma_miR2583
Species Glycine max
Class miRNA
Genome position Chr6:16035994-16036125 [+]
Reference genome Glycine_max_v2.0
Source SRR1451658;SRR1451660;SRR1451663;SRR1451604
Length 24
Mature sequence(if miRNA) 109 - UUACGUGAGAACAUGAUAACAACU - 132
Stem-loop(if miRNA) --     C           AA    AUU  A  C   A    A                      U
  UUGUU UCAUGUUCUUA  UAAG   GU UU UCA AUGA UCGUGUUAUAUAUAUAUAUAUA A
  ||||| |||||||||||  ||||   || || ||| |||| ||||||||||||||||||||||
  AACAA AGUACAAGAGU  AUUC   CA AA AGU UACU AGCAUAAUAUAUAUAUAUAUAU U
UC     U           GC    ACU  C  U   G    C                      A
Stem-loop sequence UUGUUCUCAUGUUCUUAAAUAAGAUUGUAUUCUCAAAUGAAUCGUGUUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAAUACGACUCAUGUGAUAACACUCACUUACGUGAGAACAUGAUAACAACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014764168.1
ncRNA:24   UCAACAAUAGUACAAGAGUGCAUU   1
  |****|||||||||||||||||*|
targets:2805   AACAUUUAUCAUGUUCUCACGUCA   2828

1.5 PREDICTED: Glycine max uncharacterized LOC106795202 (LOC106795202), mRNA uncharacterized LOC106795202(LOC106795202) coding protein psRNATarget
XM_006588083.1
ncRNA:24   UCAACAAUAGUACAAGAGUGCAUU   1
  |****|||||=|||||||||||*|
targets:218   AACAUUUAUCGUGUUCUCACGUCA   241

2.5 PREDICTED: Glycine max uncharacterized LOC102662924 (LOC102662924), mRNA uncharacterized LOC102662924(LOC102662924) coding protein psRNATarget