ncRNA ID | novel_gma_miR2583 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:16035994-16036125 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451658;SRR1451660;SRR1451663;SRR1451604 |
Length | 24 |
Mature sequence(if miRNA) | 109 - UUACGUGAGAACAUGAUAACAACU - 132 |
Stem-loop(if miRNA) |
--     C           AA    AUU  A  C   A    A                      U   UUGUU UCAUGUUCUUA  UAAG   GU UU UCA AUGA UCGUGUUAUAUAUAUAUAUAUA A   ||||| |||||||||||  ||||   || || ||| |||| ||||||||||||||||||||||   AACAA AGUACAAGAGU  AUUC   CA AA AGU UACU AGCAUAAUAUAUAUAUAUAUAU U UC     U           GC    ACU  C  U   G    C                      A |
Stem-loop sequence | UUGUUCUCAUGUUCUUAAAUAAGAUUGUAUUCUCAAAUGAAUCGUGUUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAAUACGACUCAUGUGAUAACACUCACUUACGUGAGAACAUGAUAACAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014764168.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC106795202 (LOC106795202), mRNA | uncharacterized LOC106795202(LOC106795202) | coding protein | psRNATarget | |||||||||
XM_006588083.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102662924 (LOC102662924), mRNA | uncharacterized LOC102662924(LOC102662924) | coding protein | psRNATarget |