ncRNA ID | novel_gma_miR2575 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:18206125-18206212 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451658;SRR1451661;SRR1294484;SRR1295521;SRR1295531;SRR1451625 |
Length | 21 |
Mature sequence(if miRNA) | 68 - CAAACAUGAGAAAUAGCGGCC - 88 |
Stem-loop(if miRNA) |
CUUUGUUUUUA   -       ----GAC   ACCGGGGAACGGGAAUAAU            GGU GUUAUUU       GGA                   U            ||| |||||||       |||            CCG CGAUAAA       AAC                   U -----------   G       GAGUACA   UUACAGUUUCUUGGGUUUU |
Stem-loop sequence | CUUUGUUUUUAGGUGUUAUUUGACGGAACCGGGGAACGGGAAUAAUUUUUUUGGGUUCUUUGACAUUCAAACAUGAGAAAUAGCGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT095187.1 |
|
3.0 | Soybean clone JCVI-FLGm-6N2 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
BT093834.1 |
|
3.0 | Soybean clone JCVI-FLGm-24O10 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
AK287363.1 |
|
3.0 | Glycine max cDNA, clone: GMFL01-51-H23 | NA | coding protein | psRNATarget | |||||||||
XM_003551889.3 |
|
3.0 | PREDICTED: Glycine max spermidine hydroxycinnamoyl transferase-like (LOC100778626), mRNA | spermidine hydroxycinnamoyl transferase-like(LOC100778626) | coding protein | psRNATarget |