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BaseInfo

ncRNA ID novel_gma_miR2569
Species Glycine max
Class miRNA
Genome position Chr15:37098232-37098320 [+]
Reference genome Glycine_max_v2.0
Source SRR1294484;SRR1451615
Length 22
Mature sequence(if miRNA) 1 - CUUGGAUUAGUGGGCUGAACCC - 22
Stem-loop(if miRNA) --C       A    -  UG  -CCCU  CU      -       C
   UUGGAUU GUGG GC  AA     AG  GAAAUU CACUAAU A
   ||||||| |||| ||  ||     ||  |||||| |||||||
   AACUUAA CAUC CG  UU     UC  UUUUAA GUGAUUA U
UUA       A    U  GU  AAACC  AG      A       A
Stem-loop sequence CUUGGAUUAGUGGGCUGAACCCUAGCUGAAAUUCACUAAUCAUAAUUAGUGAAAUUUUGACUCCAAAUUUGGCUCUACAAAUUCAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006578394.2
ncRNA:22   CCCAAGUCGGGUGAUUAGGUUC   1
  ****|||*||||||||||||||
targets:106   UUUCUCAACCCACUAAUCCAAG   127

2.0 PREDICTED: Glycine max uncharacterized LOC102662789 (LOC102662789), mRNA uncharacterized LOC102662789(LOC102662789) coding protein psRNATarget