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BaseInfo

ncRNA ID novel_gma_miR2568
Species Glycine max
Class miRNA
Genome position Chr3:29335103-29335169 [-]
Reference genome Glycine_max_v2.0
Source SRR1451658
Length 22
Mature sequence(if miRNA) 1 - UGUAGAAAACCGAUGUUAACGU - 22
Stem-loop(if miRNA) --                 --    U        U
  GUUAACAUCGGUUUUUU  GGAA AACCGAUG U
  |||||||||||||||||  |||| ||||||||
  CAAUUGUAGCCAAAAGA  UCUU UUGGCUAC A
UG                 UG    -        A
Stem-loop sequence GUUAACAUCGGUUUUUUGGAAUAACCGAUGUUAACAUCGGUUUUCUGUAGAAAACCGAUGUUAACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535883.3
ncRNA:22   UGCAAUUGUAGCCAAAAGAUGU   1
  |***|||||||*||||||||||
targets:1166   AGCAUAACAUCCGUUUUCUACA   1187

2.5 PREDICTED: Glycine max uncharacterized LOC100811261 (LOC100811261), transcript variant X1, mRNA uncharacterized LOC100811261(LOC100811261) coding protein psRNATarget
XM_014763115.1
ncRNA:22   UGCAAUUGUAGCCAAAAGAUGU   1
  |***|||||||*||||||||||
targets:1166   AGCAUAACAUCCGUUUUCUACA   1187

2.5 PREDICTED: Glycine max uncharacterized LOC100811261 (LOC100811261), transcript variant X2, mRNA uncharacterized LOC100811261(LOC100811261) coding protein psRNATarget
XM_014767463.1
ncRNA:22   UGCAAUUGUAGCCAAAAGAUGU   1
  *=*|*||||||*||||||||||
targets:2695   CUCUAAACAUCCGUUUUCUACA   2716

2.5 PREDICTED: Glycine max respiratory burst oxidase homolog protein E-like (LOC100796455), transcript variant X2, mRNA respiratory burst oxidase homolog protein E-like(LOC100796455) coding protein psRNATarget
XM_014767462.1
ncRNA:22   UGCAAUUGUAGCCAAAAGAUGU   1
  *=*|*||||||*||||||||||
targets:3118   CUCUAAACAUCCGUUUUCUACA   3139

2.5 PREDICTED: Glycine max respiratory burst oxidase homolog protein E-like (LOC100796455), transcript variant X1, mRNA respiratory burst oxidase homolog protein E-like(LOC100796455) coding protein psRNATarget