ncRNA ID | novel_gma_miR2566 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:30642392-30642539 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294484;SRR1294485;SRR1295516;SRR2968974;SRR2968978;SRR3067737;SRR835762;SRR835763;SRR835765;SRR1292925;SRR835770;SRR835771;SRR835772;SRR835773;SRR1295521;SRR1295527;SRR1295531;SRR1292929;SRR1451610;SRR1451613;SRR1294474;SRR1294476;SRR1451621;SRR1292924;SRR1451622;SRR1451623 |
Length | 24 |
Mature sequence(if miRNA) | 125 - AAGUGAUGACGUGACAGAUAGAGU - 148 |
Stem-loop(if miRNA) |
--                G UA     C         AC   CAA    UG    G   G            GA   AAGUGAUGACGUGACA A  GAGUG CACAUCAUC  GCC   UCAU  ACAC UUA UGUCACAUCAUU  A   |||||||||||||||| |  ||||| |||||||||  |||   ||||  |||| ||| ||||||||||||   UUUACUACUGCACUGU U  CUCAC GUGUAGUAG  CGG   AGUG  UGUG AGU ACGGUGUAGUAG  G AA                A GC     A         GA   AAC    GU    G   A            UG |
Stem-loop sequence | AAGUGAUGACGUGACAGAUAGAGUGCCACAUCAUCACGCCCAAUCAUUGACACGUUAGUGUCACAUCAUUGAAGGUGAUGAUGUGGCAAUGAGGUGUUGGUGACAAGGCAGGAUGAUGUGACACUCCGUAUGUCACGUCAUCAUUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766262.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA | uncharacterized LOC100804377(LOC100804377) | coding protein | psRNATarget |