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BaseInfo

ncRNA ID novel_gma_miR2566
Species Glycine max
Class miRNA
Genome position Chr10:30642392-30642539 [-]
Reference genome Glycine_max_v2.0
Source SRR1294484;SRR1294485;SRR1295516;SRR2968974;SRR2968978;SRR3067737;SRR835762;SRR835763;SRR835765;SRR1292925;SRR835770;SRR835771;SRR835772;SRR835773;SRR1295521;SRR1295527;SRR1295531;SRR1292929;SRR1451610;SRR1451613;SRR1294474;SRR1294476;SRR1451621;SRR1292924;SRR1451622;SRR1451623
Length 24
Mature sequence(if miRNA) 125 - AAGUGAUGACGUGACAGAUAGAGU - 148
Stem-loop(if miRNA) --                G UA     C         AC   CAA    UG    G   G            GA
  AAGUGAUGACGUGACA A  GAGUG CACAUCAUC  GCC   UCAU  ACAC UUA UGUCACAUCAUU  A
  |||||||||||||||| |  ||||| |||||||||  |||   ||||  |||| ||| ||||||||||||
  UUUACUACUGCACUGU U  CUCAC GUGUAGUAG  CGG   AGUG  UGUG AGU ACGGUGUAGUAG  G
AA                A GC     A         GA   AAC    GU    G   A            UG
Stem-loop sequence AAGUGAUGACGUGACAGAUAGAGUGCCACAUCAUCACGCCCAAUCAUUGACACGUUAGUGUCACAUCAUUGAAGGUGAUGAUGUGGCAAUGAGGUGUUGGUGACAAGGCAGGAUGAUGUGACACUCCGUAUGUCACGUCAUCAUUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766262.1
ncRNA:24   UGAGAUAGACAGUGCAGUAGUGAA   1
  |||||=|=|*||||||||||||||
targets:758   ACUCUGUUUAUCACGUCAUCACUU   781

3.0 PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA uncharacterized LOC100804377(LOC100804377) coding protein psRNATarget