Search result

BaseInfo

ncRNA ID ath-miR8121
Species Arabidopsis thaliana
Class miRNA
Genome position chr2:16587970-16588110 [-]
Reference genome TAIR10
Source miRBase
Length 24
Mature sequence(if miRNA) 108 - AAAGUAUAAUGGUUUAGUGGUUUG - 131
Stem-loop(if miRNA) AUAAAU   -U   G         U           ------GUUGUCCU       GUUC     --AAC  GU
      CCU  AAA UAUAAUGGU UAGUGGUUUGA              ACUAAUU    AAGGU     GA  U
      |||  ||| ||||||||| |||||||||||              |||||||    |||||     ||
      GGA  UUU AUAUUACUA AUUAUCAAACU              UGAUUAA    UUCCA     CU  C
-UAAAU   UU   G         C           AAAUGAAUGUAAAU       -AAA     GACAA  AG
Stem-loop sequence AUAAAUCCUUAAAGUAUAAUGGUUUAGUGGUUUGAGUUGUCCUACUAAUUGUUCAAGGUAACGAGUUCGAUCAACAGACCUUAAAAAUUAGUUAAAUGUAAGUAAAUCAAACUAUUACAUCAUUAUAGUUUUUAGGUAAAU

Reference

1 PMID:23709668
"Comprehensive investigation of microRNAs enhanced by analysis of sequence variants, expression patterns, ARGONAUTE loading, and target cleavage";
Jeong DH, Thatcher SR, Brown RS, Zhai J, Park S, Rymarquis LA, Meyers BC, Green PJ;
Plant Physiol. 162:1225-1245(2013).