ncRNA ID | novel_gma_miR2554 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:37460794-37460892 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451658 |
Length | 22 |
Mature sequence(if miRNA) | 78 - UUGAAAAUCACAAUGAAAUCGU - 99 |
Stem-loop(if miRNA) |
--    A                      C      --------G      CC   UUGA AAUCACAAUGAAAUCGUAUUUU AUUGUG         UGUUUU  A   |||| |||||||||||||||||||||| ||||||         ||||||  A   AACU UUAGUGUUACUUUAGUAUAAAA UAAUAU         ACAAAA  A CC    C                      A      AAAAAUAAA      UA |
Stem-loop sequence | UUGAAAAUCACAAUGAAAUCGUAUUUUCAUUGUGGUGUUUUCCAAAAUAAAACAAAAUAAAAAUAUAAUAAAAAUAUGAUUUCAUUGUGAUUCUCAACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006606737.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102662241 (LOC102662241), mRNA | uncharacterized LOC102662241(LOC102662241) | coding protein | psRNATarget | |||||||||
XM_003541946.3 |
|
2.5 | PREDICTED: Glycine max protein SAND-like (LOC100814534), transcript variant X2, mRNA | protein SAND-like(LOC100814534) | coding protein | psRNATarget |