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BaseInfo

ncRNA ID novel_gma_miR2551
Species Glycine max
Class miRNA
Genome position Chr18:22920644-22920720 [-]
Reference genome Glycine_max_v2.0
Source SRR1451658
Length 24
Mature sequence(if miRNA) 54 - UUGACAUCGGUUUUUUAGAAAAAC - 77
Stem-loop(if miRNA) --               U                   G
  UUGACAUCGGUUUUU AGAAAAACCGAUGUUAAUG C
  ||||||||||||||| ||||||||||||||||||| A
  AAUUGUAGCUAAAAG UCUUUUUGGCUACAAUUAU U
CA               U                   A
Stem-loop sequence UUGACAUCGGUUUUUUAGAAAAACCGAUGUUAAUGGCAUAUAUUAACAUCGGUUUUUCUUGAAAAUCGAUGUUAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001255117.2
ncRNA:24   CAAAAAGAU-UUUUUGGCUACAGUU   1
  *|***|||=-|||||||||||||||
targets:265   AUGGAUCUGCAAAAACCGAUGUCAA   289

3.0 Glycine max serine/threonine-protein kinase PBS1-like (LOC100790828), mRNA serine/threonine-protein kinase PBS1-like(LOC100790828) coding protein psRNATarget
BT093988.1
ncRNA:24   CAAAAAGAU-UUUUUGGCUACAGUU   1
  *|***|||=-|||||||||||||||
targets:267   AUGGAUCUGCAAAAACCGAUGUCAA   291

3.0 Soybean clone JCVI-FLGm-18C7 unknown mRNA NA coding protein psRNATarget