ncRNA ID | novel_gma_miR2551 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:22920644-22920720 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451658 |
Length | 24 |
Mature sequence(if miRNA) | 54 - UUGACAUCGGUUUUUUAGAAAAAC - 77 |
Stem-loop(if miRNA) |
--               U                   G   UUGACAUCGGUUUUU AGAAAAACCGAUGUUAAUG C   ||||||||||||||| ||||||||||||||||||| A   AAUUGUAGCUAAAAG UCUUUUUGGCUACAAUUAU U CA               U                   A |
Stem-loop sequence | UUGACAUCGGUUUUUUAGAAAAACCGAUGUUAAUGGCAUAUAUUAACAUCGGUUUUUCUUGAAAAUCGAUGUUAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001255117.2 |
|
3.0 | Glycine max serine/threonine-protein kinase PBS1-like (LOC100790828), mRNA | serine/threonine-protein kinase PBS1-like(LOC100790828) | coding protein | psRNATarget | |||||||||
BT093988.1 |
|
3.0 | Soybean clone JCVI-FLGm-18C7 unknown mRNA | NA | coding protein | psRNATarget |