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BaseInfo

ncRNA ID novel_gma_miR2548
Species Glycine max
Class miRNA
Genome position Chr15:27124587-27124684 [+]
Reference genome Glycine_max_v2.0
Source SRR1294484;SRR2045230;SRR1295522
Length 24
Mature sequence(if miRNA) 75 - UUUCCACAUCGUUCCUGACAUCAG - 98
Stem-loop(if miRNA) --     A  C        A                            A
  GAUGU AG AAUGAUGU GAAAUAUGUAGUUUCUAAGAUGGUGCUG C
  ||||| || |||||||| ||||||||||||||||||||||||||||
  CUACA UC UUGCUACA CUUUAUACAUCAAAGAUUCUGCUACGAC G
GA     G  C        C                            U
Stem-loop sequence GAUGUAAGCAAUGAUGUAGAAAUAUGUAGUUUCUAAGAUGGUGCUGACGUCAGCAUCGUCUUAGAAACUACAUAUUUCCACAUCGUUCCUGACAUCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770783.1
ncRNA:24   GACU---ACAGUCCUUGCUACACCUUU   1
  *||=---||*=|||||||||||||||*
targets:136   AUGGGUUUGGUAGGAACGAUGUGGAAU   162

3.0 PREDICTED: Glycine max uncharacterized LOC106797076 (LOC106797076), mRNA uncharacterized LOC106797076(LOC106797076) coding protein psRNATarget