Search result

BaseInfo

ncRNA ID novel_gma_miR2538
Species Glycine max
Class miRNA
Genome position Chr1:33582647-33582806 [+]
Reference genome Glycine_max_v2.0
Source SRR1451658
Length 24
Mature sequence(if miRNA) 137 - ACCGAUGUUAACUGUCAACGCUGU - 160
Stem-loop(if miRNA) --AA     GA          A      A  ------C            GAA           C       G   U     AA
    CGUUG  AGUUAACAUC GUUUUA AC       GAUGUUAACUUC   AAUGUUAACAU GAUUUUA UAA AAGUU  C
    |||||  |||||||||| |||||| ||       ||||||||||||   ||||||||||| ||||||| ||| |||||
    GCAAC  UCAAUUGUAG CAAAAU UG       CUACAAUUGAAG   UUACAAUUGUA CUAAAAU AUU UUUAG  A
UGUC     UG          C      A  UUUUUAA            --G           A       A   U     CU
Stem-loop sequence AACGUUGGAAGUUAACAUCAGUUUUAAACCGAUGUUAACUUCGAAAAUGUUAACAUCGAUUUUAGUAAUAAGUUAACAUCGAUUUUUUAAUAAAAUCAAUGUUAACAUUGGAAGUUAACAUCAAUUUUUGUAUAAAACCGAUGUUAACUGUCAACGCUGU