ncRNA ID | novel_gma_miR2527 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:22223880-22223979 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451658;SRR1753105;SRR1294486;SRR2045377;SRR1451607;SRR1451609;SRR1451611;SRR1292924 |
Length | 21 |
Mature sequence(if miRNA) | 80 - GACGAUGAUGAUAAAUGUGAU - 100 |
Stem-loop(if miRNA) |
-GAC     --       U   AUUC  UU   AU   A    UC   AUU     GAUGA  UGAUAAA GUG    AC  AUU  GAG UCCU  GCC   U     |||||  ||||||| |||    ||  |||  ||| ||||  |||     UUAUU  AUUGUUU CAC    UG  UAA  CUC AGGA  UGG   G UGUU     UC       U   -AUA  UC   CC   A    CC   AAA |
Stem-loop sequence | GACGAUGAUGAUAAAUGUGAUUCACUUAUUAUGAGAUCCUUCGCCAUUUGAAAGGUCCAGGAACUCCCAAUCUGUAUACACUUUUGUUACUUUAUUUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003550868.3 |
|
2.5 | PREDICTED: Glycine max transcription factor bHLH148-like (LOC100803765), mRNA | transcription factor bHLH148-like(LOC100803765) | coding protein | psRNATarget | |||||||||
XM_003517500.3 |
|
3.0 | PREDICTED: Glycine max cellulose synthase-like protein D2 (LOC100792604), mRNA | cellulose synthase-like protein D2(LOC100792604) | coding protein | psRNATarget |