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BaseInfo

ncRNA ID novel_gma_miR2527
Species Glycine max
Class miRNA
Genome position Chr13:22223880-22223979 [-]
Reference genome Glycine_max_v2.0
Source SRR1451658;SRR1753105;SRR1294486;SRR2045377;SRR1451607;SRR1451609;SRR1451611;SRR1292924
Length 21
Mature sequence(if miRNA) 80 - GACGAUGAUGAUAAAUGUGAU - 100
Stem-loop(if miRNA) -GAC     --       U   AUUC  UU   AU   A    UC   AUU
    GAUGA  UGAUAAA GUG    AC  AUU  GAG UCCU  GCC   U
    |||||  ||||||| |||    ||  |||  ||| ||||  |||
    UUAUU  AUUGUUU CAC    UG  UAA  CUC AGGA  UGG   G
UGUU     UC       U   -AUA  UC   CC   A    CC   AAA
Stem-loop sequence GACGAUGAUGAUAAAUGUGAUUCACUUAUUAUGAGAUCCUUCGCCAUUUGAAAGGUCCAGGAACUCCCAAUCUGUAUACACUUUUGUUACUUUAUUUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003550868.3
ncRNA:21   UAGUGUAAAUAGUAGUAGCAG   1
  =||||*||*||||||||||||
targets:220   GUCACCUUCAUCAUCAUCGUC   240

2.5 PREDICTED: Glycine max transcription factor bHLH148-like (LOC100803765), mRNA transcription factor bHLH148-like(LOC100803765) coding protein psRNATarget
XM_003517500.3
ncRNA:21   UAGUGUAAAUAGUAGUAGCAG   1
  ||||=*|*|||||||||||||
targets:333   AUCAUCUAUAUCAUCAUCGUC   353

3.0 PREDICTED: Glycine max cellulose synthase-like protein D2 (LOC100792604), mRNA cellulose synthase-like protein D2(LOC100792604) coding protein psRNATarget