Search result

BaseInfo

ncRNA ID novel_gma_miR2526
Species Glycine max
Class miRNA
Genome position Chr13:30923480-30923541 [-]
Reference genome Glycine_max_v2.0
Source SRR1451658
Length 21
Mature sequence(if miRNA) 42 - UUUUGUGACAAUUAAUUUUGU - 62
Stem-loop(if miRNA) --         A          UUCUAAUAU
  UUUUGUGAC AUUAAUUUUG         A
  ||||||||| ||||||||||
  AAAACACUG UAAUUAAAAC         U
UU         A          CACGUAAUU
Stem-loop sequence UUUUGUGACAAUUAAUUUUGUUCUAAUAUAUUUAAUGCACCAAAAUUAAUAGUCACAAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547522.3
ncRNA:21   UGUUUUAAUUAACAGUGUUUU   1
  =*||||||||||||||=||||
targets:2554   GAAAAAUUAAUUGUCAUAAAA   2574

1.5 PREDICTED: Glycine max uncharacterized LOC100808161 (LOC100808161), mRNA uncharacterized LOC100808161(LOC100808161) coding protein psRNATarget
XM_003532129.3
ncRNA:21   UGUUUUAAUUAACAGUGUUUU   1
  =|*|||||||||||||||||*
targets:550   GCCAAAUUAAUUGUCACAAAU   570

2.0 PREDICTED: Glycine max 4-coumarate--CoA ligase-like 1 (LOC100814237), mRNA 4-coumarate--CoA ligase-like 1(LOC100814237) coding protein psRNATarget
BT094736.1
ncRNA:21   UGUUUUAAUUAACAGUGUUUU   1
  *==||||*|||||||||||||
targets:150   UUGAAAUCAAUUGUCACAAAA   170

2.0 Soybean clone JCVI-FLGm-6G15 unknown mRNA NA coding protein psRNATarget