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BaseInfo

ncRNA ID	novel_gma_miR2522
Species	Glycine max
Class	miRNA
Genome position	Chr4:18330110-18330166 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1292924;SRR1294487;SRR1295518;SRR1295519
Length	24
Mature sequence(if miRNA)	34 - AGGAAGAGAGAGAAGAUUUGGGCU - 57
Stem-loop(if miRNA)	-                U   GGC   U  AGGAAGAGAGAGAAGA UUG   UUU U  |||||||||||||||| |||   |||  UUUUUCUUUUUCUUUU AGU   AAA A C                U   AAA   U
Stem-loop sequence	AGGAAGAGAGAGAAGAUUUGGGCUUUUUAUAAAAAAUGAUUUUUCUUUUUCUUUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001289284.1	ncRNA:24   UCGGGUUUAGAAGAGAGAGAAGGA   1   *|=|||||*||||||||||||||* targets:21   CGUCCAAAGCUUCUCUCUCUUCCA   44 Target Full Sequence	2.0	Glycine max pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like (LOC100800884), mRNA	pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like(LOC100800884)	coding protein	psRNATarget
BT094601.1	ncRNA:24   UCGGGUUUAGAAGAGAGAGAAGGA   1   *|=|||||*||||||||||||||* targets:22   CGUCCAAAGCUUCUCUCUCUUCCA   45 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-24N24 unknown mRNA	NA	coding protein	psRNATarget
XM_006597691.2	ncRNA:24   UCGGGUUUAGAAGAGAGAGAAGGA   1   *|=|||||*||||||||||||||* targets:96   CGUCCAAAGCUUCUCUCUCUUCCA   119 Target Full Sequence	2.0	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like (LOC100800884), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like(LOC100800884)	coding protein	psRNATarget
NM_001255111.2	ncRNA:24   UCGGGUUUAGAAGAGAGAGAAGGA   1   *|*|||||*||||||||||||||* targets:24   CGGCCAAAGCUUCUCUCUCUUCCA   47 Target Full Sequence	2.0	Glycine max haloacid dehalogenase-like hydrolase domain-containing protein 3-like (LOC100815659), mRNA	haloacid dehalogenase-like hydrolase domain-containing protein 3-like(LOC100815659)	coding protein	psRNATarget
BT095445.1	ncRNA:24   UCGGGUUUAGAAGAGAGAGAAGGA   1   *|*|||||*||||||||||||||* targets:26   CGGCCAAAGCUUCUCUCUCUUCCA   49 Target Full Sequence	2.0	Soybean clone JCVI-FLGm-19K6 unknown mRNA	NA	coding protein	psRNATarget
XM_003546527.3	ncRNA:24   UCGGGUUUAGAAGAGAGAGAAGGA   1   ||||-||||=||||||||||||=| targets:30   AGCC-AAAUUUUCUCUCUCUUCUU   52 Target Full Sequence	2.5	PREDICTED: Glycine max protein MEI2-like 5 (LOC100800877), mRNA	protein MEI2-like 5(LOC100800877)	coding protein	psRNATarget
XM_003548648.3	ncRNA:24   UCGGGUUUAGAAGAGAGAGAAGGA   1   |*=||||||=||||||||||*||| targets:154   AAUCCAAAUUUUCUCUCUCUGCCU   177 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like (LOC100796114), mRNA	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like(LOC100796114)	coding protein	psRNATarget
XM_014766054.1	ncRNA:24   UCGG-GUUUAGAAGAGAGAGAAGGA   1   |||=-|||*||||||||||||*||| targets:38   AGCUUCAAUUCUUCUCUCUCUCCCU   62 Target Full Sequence	2.5	PREDICTED: Glycine max serine/threonine-protein phosphatase 6 regulatory subunit 3-B-like (LOC100802276), transcript variant X3, mRNA	serine/threonine-protein phosphatase 6 regulatory subunit 3-B-like(LOC100802276)	coding protein	psRNATarget
XM_003551529.3	ncRNA:24   UCGGGUUUAG-AAGAGAGAGAAGGA   1   **|=|||*||-|||||||||||||| targets:230   UCCUCAACUCCUUCUCUCUCUUCCU   254 Target Full Sequence	3.0	PREDICTED: Glycine max beta-(1,2)-xylosyltransferase-like (LOC100810186), transcript variant X2, mRNA	beta-(1,2)-xylosyltransferase-like(LOC100810186)	coding protein	psRNATarget
XM_014771013.1	ncRNA:24   UCGGGUUUAG-AAGAGAGAGAAGGA   1   **|=|||*||-|||||||||||||| targets:233   UCCUCAACUCCUUCUCUCUCUUCCU   257 Target Full Sequence	3.0	PREDICTED: Glycine max beta-(1,2)-xylosyltransferase-like (LOC100810186), transcript variant X1, mRNA	beta-(1,2)-xylosyltransferase-like(LOC100810186)	coding protein	psRNATarget