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BaseInfo

ncRNA ID novel_gma_miR2501
Species Glycine max
Class miRNA
Genome position Chr9:35217054-35217104 [+]
Reference genome Glycine_max_v2.0
Source SRR1451657
Length 22
Mature sequence(if miRNA) 1 - UUUUGGUAGAGAACGAAACCCU - 22
Stem-loop(if miRNA) --      U           -CC UA
  UUUUGG AGAGAACGAAA   C  A
  |||||| |||||||||||   |
  GGAGCU UCUUUUGCUUU   G  U
AU      U           CCA UC
Stem-loop sequence UUUUGGUAGAGAACGAAACCCUAAUCUGACCUUUCGUUUUCUUUCGAGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774333.1
ncRNA:22   UCCCAAAGCAAGAGAUGGUUUU   1
  =*||*||||||||*||||||||
targets:25   GUGGCUUCGUUCUAUACCAAAA   46

2.5 PREDICTED: Glycine max uncharacterized LOC100500653 (LOC100500653), transcript variant X1, mRNA uncharacterized LOC100500653(LOC100500653) coding protein psRNATarget