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BaseInfo

ncRNA ID novel_gma_miR2489
Species Glycine max
Class miRNA
Genome position Chr6:45559049-45559129 [-]
Reference genome Glycine_max_v2.0
Source SRR1451657
Length 21
Mature sequence(if miRNA) 61 - UUUGGAUAGAGAAUUUUAGCU - 81
Stem-loop(if miRNA) -U     -   A         CUG G      ---    UAU
  UUGGA UAG GAAUUUUAG   A AGAAGU   AAUU   C
  ||||| ||| |||||||||   | ||||||   ||||
  AGCUU GUC CUUAAGAUU   U UCUUUA   UUAA   A
GU     U   A         UAA G      AAU    UAU
Stem-loop sequence UUUGGAUAGAGAAUUUUAGCUGAGAGAAGUAAUUUAUCAUAUAAUUUAAAUUUCUGUAAUUUAGAAUUCACUGUUUCGAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006599393.2
ncRNA:21   UCGAUUUUAAGAGAUAGGUUU   1
  **|||*||||||||||=||||
targets:284   CUCUACAAUUCUCUAUUCAAA   304

2.5 PREDICTED: Glycine max TMV resistance protein N-like (LOC100805685), mRNA TMV resistance protein N-like(LOC100805685) coding protein psRNATarget