ncRNA ID | novel_gma_miR2486 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:26163169-26163269 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451657 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGUGAAGAGGCUAACAAAUUCGU - 24 |
Stem-loop(if miRNA) |
--     A    -   A           UCUG   ---- A GGAAAUUCAAAU   AUGUG AGAG GCU ACAAAUUCGUC    AAA    U U            U   ||||| |||| ||| |||||||||||    |||    | |   UACAC UCUC UGA UGUUUAAGCAG    CGG    G G            U CU     A    G   C           --UG   AAAA U AAAGCCCCUGAA |
Stem-loop sequence | AUGUGAAGAGGCUAACAAAUUCGUCUCUGAAAUAUGGAAAUUCAAAUUUAAGUCCCCGAAAGUGAAAAGGCGUGACGAAUUUGUCAGUGCUCUACACAUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006596255.2 |
|
2.5 | PREDICTED: Glycine max probable glycerol-3-phosphate acyltransferase 3 (LOC100809733), mRNA | probable glycerol-3-phosphate acyltransferase 3(LOC100809733) | coding protein | psRNATarget | |||||||||
XM_006585450.2 |
|
2.5 | PREDICTED: Glycine max EPIDERMAL PATTERNING FACTOR-like protein 2 (LOC102664780), mRNA | EPIDERMAL PATTERNING FACTOR-like protein 2(LOC102664780) | coding protein | psRNATarget |