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BaseInfo

ncRNA ID novel_gma_miR2486
Species Glycine max
Class miRNA
Genome position Chr6:26163169-26163269 [+]
Reference genome Glycine_max_v2.0
Source SRR1451657
Length 24
Mature sequence(if miRNA) 1 - AUGUGAAGAGGCUAACAAAUUCGU - 24
Stem-loop(if miRNA) --     A    -   A           UCUG   ---- A GGAAAUUCAAAU
  AUGUG AGAG GCU ACAAAUUCGUC    AAA    U U            U
  ||||| |||| ||| |||||||||||    |||    | |
  UACAC UCUC UGA UGUUUAAGCAG    CGG    G G            U
CU     A    G   C           --UG   AAAA U AAAGCCCCUGAA
Stem-loop sequence AUGUGAAGAGGCUAACAAAUUCGUCUCUGAAAUAUGGAAAUUCAAAUUUAAGUCCCCGAAAGUGAAAAGGCGUGACGAAUUUGUCAGUGCUCUACACAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006596255.2
ncRNA:24   UGCU--UAAACAAUCGGAGAAGUGUA   1
  **||--||||*||||||||||||*||
targets:863   UGGAUUAUUUCUUAGCCUCUUCAGAU   888

2.5 PREDICTED: Glycine max probable glycerol-3-phosphate acyltransferase 3 (LOC100809733), mRNA probable glycerol-3-phosphate acyltransferase 3(LOC100809733) coding protein psRNATarget
XM_006585450.2
ncRNA:24   UGCUUAAACAAUCGGAGAAGUGUA   1
  =|***||||*|||||||||||=||
targets:319   GCUCCUUUGGUAGCCUCUUCAUAU   342

2.5 PREDICTED: Glycine max EPIDERMAL PATTERNING FACTOR-like protein 2 (LOC102664780), mRNA EPIDERMAL PATTERNING FACTOR-like protein 2(LOC102664780) coding protein psRNATarget