Search result

BaseInfo

ncRNA ID	novel_gma_miR2472
Species	Glycine max
Class	miRNA
Genome position	Chr1:2415630-2415743 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1292924
Length	22
Mature sequence(if miRNA)	1 - CACAAUGUGAAUCUGAAGGACU - 22
Stem-loop(if miRNA)	--         A                            G   CU      -   A   CACAAUGUG AUCUGAAGGACUUUGUUCGGCUUGUAAU AGG  GGGCUA GAA U   ||||||||| |||||||||||||||||||||||||||| |||  |||||| ||| A   GUGUUACAC UAGACUUCCUGAAACAAGCCGAACGUUG UUC  UUUGGU CUU A GU         C                            G   UU      A   A
Stem-loop sequence	CACAAUGUGAAUCUGAAGGACUUUGUUCGGCUUGUAAUGAGGCUGGGCUAGAAAUAAAUUCAUGGUUUUUCUUGGUUGCAAGCCGAACAAAGUCCUUCAGAUCCACAUUGUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014761987.1	ncRNA:22   UCAGGAAGUCUAAGUGUAACAC   1   ***||||||||||||||*|||* targets:1121   CAACCUUCAGAUUCACAAUGUU   1142 Target Full Sequence	2.5	PREDICTED: Glycine max CRS2-associated factor 2, mitochondrial-like (LOC100808888), transcript variant X3, mRNA	CRS2-associated factor 2, mitochondrial-like(LOC100808888)	coding protein	psRNATarget
XM_006587007.2	ncRNA:22   UCAGGAAGUCUAAGUGUAACAC   1   ***||||||||||||||*|||* targets:1121   CAACCUUCAGAUUCACAAUGUU   1142 Target Full Sequence	2.5	PREDICTED: Glycine max CRS2-associated factor 2, mitochondrial-like (LOC100808888), transcript variant X5, mRNA	CRS2-associated factor 2, mitochondrial-like(LOC100808888)	coding protein	psRNATarget
XM_014774284.1	ncRNA:22   UCAGGAAGUCUAAGUGUAACAC   1   ***||||||||||||||*|||* targets:1176   CAACCUUCAGAUUCACAAUGUU   1197 Target Full Sequence	2.5	PREDICTED: Glycine max CRS2-associated factor 2, mitochondrial-like (LOC100789092), transcript variant X3, mRNA	CRS2-associated factor 2, mitochondrial-like(LOC100789092)	coding protein	psRNATarget
XM_014774286.1	ncRNA:22   UCAGGAAGUCUAAGUGUAACAC   1   ***||||||||||||||*|||* targets:1176   CAACCUUCAGAUUCACAAUGUU   1197 Target Full Sequence	2.5	PREDICTED: Glycine max CRS2-associated factor 2, mitochondrial-like (LOC100789092), transcript variant X4, mRNA	CRS2-associated factor 2, mitochondrial-like(LOC100789092)	coding protein	psRNATarget