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BaseInfo

ncRNA ID novel_gma_miR2460
Species Glycine max
Class miRNA
Genome position Chr20:16897502-16897586 [-]
Reference genome Glycine_max_v2.0
Source SRR1451657;SRR1451605
Length 24
Mature sequence(if miRNA) 62 - AGAGAAAUACAAUACUAUUAAGAC - 85
Stem-loop(if miRNA) --                                   CUUUU
  AGAGAAAUACAAUACUAUUAAGACAACUAAAAUAU     G
  |||||||||||||||||||||||||||||||||||     A
  UCUCUUUAUGUUAUGAUAAUUCUGUUGAUUUUAUA     U
UG                                   CAUAU
Stem-loop sequence AGAGAAAUACAAUACUAUUAAGACAACUAAAAUAUCUUUUGAUUAUACAUAUUUUAGUUGUCUUAAUAGUAUUGUAUUUCUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006601929.2
ncRNA:24   CAGAAUUAUCAUAACAUAAAGAGA   1
  **|||||*||||||||||||||=|
targets:2446   UGCUUAAGAGUAUUGUAUUUCUUU   2469

2.5 PREDICTED: Glycine max uncharacterized LOC100802549 (LOC100802549), transcript variant X2, mRNA uncharacterized LOC100802549(LOC100802549) coding protein psRNATarget
XM_006601928.2
ncRNA:24   CAGAAUUAUCAUAACAUAAAGAGA   1
  **|||||*||||||||||||||=|
targets:2566   UGCUUAAGAGUAUUGUAUUUCUUU   2589

2.5 PREDICTED: Glycine max uncharacterized LOC100802549 (LOC100802549), transcript variant X1, mRNA uncharacterized LOC100802549(LOC100802549) coding protein psRNATarget