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BaseInfo

ncRNA ID novel_gma_miR2457
Species Glycine max
Class miRNA
Genome position Chr19:36805317-36805484 [-]
Reference genome Glycine_max_v2.0
Source SRR1451657
Length 23
Mature sequence(if miRNA) 146 - UAUCUAAUUUUGGUCCUUGUAAG - 168
Stem-loop(if miRNA) --UAUCUAA                AUUUUAAA          A A     C    A    -------------------------CA  UACAAGC
         UUUUGGUCCUUGUAAG        UUUUUUAUUU U AUCCU AUAA UUCA                           CU       A
         ||||||||||||||||        |||||||||| | ||||| |||| ||||                           ||
         AAGACCAGGAACAUUC        AAAAAGUAAA G UAGGA UAUU AAGU                           AG       U
UUAUAUAUA                AAUUAAAA          A C     -    C    AAAAAAAUUAAAAUCAAAUAUAAAAAA  UUAAAAC
Stem-loop sequence UAUCUAAUUUUGGUCCUUGUAAGAUUUUAAAUUUUUUAUUUAUAAUCCUCAUAAAUUCACACUUACAAGCAUCAAAAUUGAAAAAAAUAUAAACUAAAAUUAAAAAAAUGAACUUAUAGGAUCGAAAAUGAAAAAAAAAUUAACUUACAAGGACCAGAAAUAUAUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544018.3
ncRNA:23   GAAUGUUCCUGGUUUUAAUCUAU   1
  **|||*|||||||||||||||||
targets:1117   GCUACCAGGACCAAAAUUAGAUA   1139

1.0 PREDICTED: Glycine max LOB domain-containing protein 21-like (LOC100777635), mRNA LOB domain-containing protein 21-like(LOC100777635) coding protein psRNATarget