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BaseInfo

ncRNA ID novel_gma_miR2455
Species Glycine max
Class miRNA
Genome position Chr19:3075408-3075494 [+]
Reference genome Glycine_max_v2.0
Source SRR1451657
Length 21
Mature sequence(if miRNA) 67 - UUUGUUAAUAACCGUCUUUGA - 87
Stem-loop(if miRNA) --               UU  G  C              ---  G
  AAAGACGGUUAUUAG  AA AA CGUCUUUGAAUGUU   GC U
  |||||||||||||||  || || ||||||||||||||   ||
  UUUCUGCCAAUAAUU  UU UU GCAGAAACUUACAG   CG C
AG               GU  A  U              UUU  U
Stem-loop sequence AAAGACGGUUAUUAGUUAAGAACCGUCUUUGAAUGUUGCGUCUGCUUUGACAUUCAAAGACGUUUAUUUGUUAAUAACCGUCUUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:21   AGUUUCUGCCAAUAAUUGUUU   1
  ||||||||||||||||||*||
targets:1492   UCAAAGACGGUUAUUAACUAA   1512

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:21   AGUUUCUGCCAAUAAUUGUUU   1
  ||||||||||||||||||*||
targets:1547   UCAAAGACGGUUAUUAACUAA   1567

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:21   AGUUUCUGCCAAUAAUUGUUU   1
  ||||||=|||||||||||*||
targets:1602   UCAAAGGCGGUUAUUAACUAA   1622

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget