ncRNA ID | novel_gma_miR2446 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:41969726-41969873 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451657 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CGUGUCAUGUUCUUAUUGGAUG - 22 |
Stem-loop(if miRNA) |
--C                         CUAC   ACA              -ACCAA  ACAACAAGAAUGCA    GUGUCAUGUUCUUAUUGGAUGAUGA    CAC   UCAUGUUUUGAUUG      UG              U    |||||||||||||||||||||||||    |||   ||||||||||||||      ||              U    CACAGUGCAAGAAUAACCUACUACU    GUG   AGUAUAAAACUAAC      CU              U GUA                         AACA   CAC              CUACAG  UAGGUACCUUAUAC |
Stem-loop sequence | CGUGUCAUGUUCUUAUUGGAUGAUGACUACCACACAUCAUGUUUUGAUUGACCAAUGACAACAAGAAUGCAUUUCAUAUUCCAUGGAUUCGACAUCCAAUCAAAAUAUGACACGUGACAAUCAUCAUCCAAUAAGAACGUGACACAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK245140.1 |
|
2.0 | Glycine max cDNA, clone: GMFL01-21-P01 | NA | coding protein | psRNATarget |