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BaseInfo

ncRNA ID novel_gma_miR2446
Species Glycine max
Class miRNA
Genome position Chr1:41969726-41969873 [+]
Reference genome Glycine_max_v2.0
Source SRR1451657
Length 22
Mature sequence(if miRNA) 1 - CGUGUCAUGUUCUUAUUGGAUG - 22
Stem-loop(if miRNA) --C                         CUAC   ACA              -ACCAA  ACAACAAGAAUGCA
   GUGUCAUGUUCUUAUUGGAUGAUGA    CAC   UCAUGUUUUGAUUG      UG              U
   |||||||||||||||||||||||||    |||   ||||||||||||||      ||              U
   CACAGUGCAAGAAUAACCUACUACU    GUG   AGUAUAAAACUAAC      CU              U
GUA                         AACA   CAC              CUACAG  UAGGUACCUUAUAC
Stem-loop sequence CGUGUCAUGUUCUUAUUGGAUGAUGACUACCACACAUCAUGUUUUGAUUGACCAAUGACAACAAGAAUGCAUUUCAUAUUCCAUGGAUUCGACAUCCAAUCAAAAUAUGACACGUGACAAUCAUCAUCCAAUAAGAACGUGACACAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK245140.1
ncRNA:22   GUAGGUUAUUCUUGUACUGUGC   1
  ||||=|||*|||||||||||||
targets:1575   CAUCUAAUCAGAACAUGACACG   1596

2.0 Glycine max cDNA, clone: GMFL01-21-P01 NA coding protein psRNATarget