ncRNA ID | novel_gma_miR2443 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:1045465-1045577 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451657 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUAGUAAUGGAAGAAAUGGAG - 21 |
Stem-loop(if miRNA) |
--              UUUA         -      ----AUAA    AAUGGGGAUGAU   CCAUUUCUUCCAUU    UAAGCUUUU AGAAAA        AUCA            G   ||||||||||||||    ||||||||| ||||||        ||||   GGUAAAGAAGGUAA    AUUCGAAAA UCUUUU        UGAA            C GA              --UG         C      AUUUACAA    GAGUAUUUCACA |
Stem-loop sequence | CCAUUUCUUCCAUUUUUAUAAGCUUUUAGAAAAAUAAAUCAAAUGGGGAUGAUGCACACUUUAUGAGAAGUAACAUUUAUUUUCUCAAAAGCUUAGUAAUGGAAGAAAUGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767134.1 |
|
3.0 | PREDICTED: Glycine max ABC transporter B family member 2-like (LOC100819045), transcript variant X2, mRNA | ABC transporter B family member 2-like(LOC100819045) | coding protein | psRNATarget | |||||||||
XM_003517626.3 |
|
3.0 | PREDICTED: Glycine max ABC transporter B family member 2-like (LOC100819045), transcript variant X1, mRNA | ABC transporter B family member 2-like(LOC100819045) | coding protein | psRNATarget |