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BaseInfo

ncRNA ID novel_gma_miR2443
Species Glycine max
Class miRNA
Genome position Chr15:1045465-1045577 [-]
Reference genome Glycine_max_v2.0
Source SRR1451657
Length 21
Mature sequence(if miRNA) 1 - UUAGUAAUGGAAGAAAUGGAG - 21
Stem-loop(if miRNA) --              UUUA         -      ----AUAA    AAUGGGGAUGAU
  CCAUUUCUUCCAUU    UAAGCUUUU AGAAAA        AUCA            G
  ||||||||||||||    ||||||||| ||||||        ||||
  GGUAAAGAAGGUAA    AUUCGAAAA UCUUUU        UGAA            C
GA              --UG         C      AUUUACAA    GAGUAUUUCACA
Stem-loop sequence CCAUUUCUUCCAUUUUUAUAAGCUUUUAGAAAAAUAAAUCAAAUGGGGAUGAUGCACACUUUAUGAGAAGUAACAUUUAUUUUCUCAAAAGCUUAGUAAUGGAAGAAAUGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767134.1
ncRNA:21   GAGGUAAAGAAGGUAAUGAUU   1
  **==||||||||||||||||=
targets:620   GGUUAUUUCUUCCAUUACUAG   640

3.0 PREDICTED: Glycine max ABC transporter B family member 2-like (LOC100819045), transcript variant X2, mRNA ABC transporter B family member 2-like(LOC100819045) coding protein psRNATarget
XM_003517626.3
ncRNA:21   GAGGUAAAGAAGGUAAUGAUU   1
  **==||||||||||||||||=
targets:722   GGUUAUUUCUUCCAUUACUAG   742

3.0 PREDICTED: Glycine max ABC transporter B family member 2-like (LOC100819045), transcript variant X1, mRNA ABC transporter B family member 2-like(LOC100819045) coding protein psRNATarget