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BaseInfo

ncRNA ID	novel_gma_miR2440
Species	Glycine max
Class	miRNA
Genome position	Chr15:22998226-22998312 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451657
Length	22
Mature sequence(if miRNA)	1 - UCAAGUUGAUCCGUAAGAGGCU - 22
Stem-loop(if miRNA)	--     -                 ---   ---U   -     UAA   CUUCU ACGGAUCAACUUGAUUC   ACA    GCU GAUUU   A   ||||| |||||||||||||||||   |||    ||| |||||   G   GGAGA UGCCUAGUUGAACUAAG   UGU    UGA CUAGA   U UC     A                 CAU   UAGU   A     UGU
Stem-loop sequence	CUUCUACGGAUCAACUUGAUUCACAUGCUGAUUUUAAAGUUGUAGAUCAAGUUGAUUGUUACGAAUCAAGUUGAUCCGUAAGAGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006584073.2	ncRNA:22   UCGGAGAAUGCCUAGUUGAACU   1   |*|=|||||*|||||||||||| targets:907   AACUUCUUAAGGAUCAACUUGA   928 Target Full Sequence	2.5	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100808312), transcript variant X4, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100808312)	coding protein	psRNATarget
XM_006584072.2	ncRNA:22   UCGGAGAAUGCCUAGUUGAACU   1   |*|=|||||*|||||||||||| targets:930   AACUUCUUAAGGAUCAACUUGA   951 Target Full Sequence	2.5	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100808312), transcript variant X3, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100808312)	coding protein	psRNATarget
XM_006584071.1	ncRNA:22   UCGGAGAAUGCCUAGUUGAACU   1   |*|=|||||*|||||||||||| targets:963   AACUUCUUAAGGAUCAACUUGA   984 Target Full Sequence	2.5	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100808312), transcript variant X1, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100808312)	coding protein	psRNATarget
XM_003529649.3	ncRNA:22   UCGGAGAAUGCCUAGUUGAACU   1   |*|=|||||*|||||||||||| targets:942   AACUUCUUAAGGAUCAACUUGA   963 Target Full Sequence	2.5	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100808312), transcript variant X2, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100808312)	coding protein	psRNATarget
XM_014767164.1	ncRNA:22   UCGGAGAAUGCCUAGUUGAACU   1   |*|*|||||*|||||||||||| targets:811   AACAUCUUAAGGAUCAACUUGA   832 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100796601 (LOC100796601), transcript variant X1, mRNA	uncharacterized LOC100796601(LOC100796601)	coding protein	psRNATarget
XM_003549965.3	ncRNA:22   UCGGAGAAUGCCUAGUUGAACU   1   |*|*|||||*|||||||||||| targets:726   AACAUCUUAAGGAUCAACUUGA   747 Target Full Sequence	2.5	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100817261), transcript variant X2, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100817261)	coding protein	psRNATarget
XM_006600200.2	ncRNA:22   UCGGAGAAUGCCUAGUUGAACU   1   |*|*|||||*|||||||||||| targets:730   AACAUCUUAAGGAUCAACUUGA   751 Target Full Sequence	2.5	PREDICTED: Glycine max mitotic spindle checkpoint protein MAD1-like (LOC100817261), transcript variant X1, mRNA	mitotic spindle checkpoint protein MAD1-like(LOC100817261)	coding protein	psRNATarget