ncRNA ID | novel_gma_miR2434 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:1818296-1818382 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451657 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACAUUGUAUUGUCUCUCUUCU - 21 |
Stem-loop(if miRNA) |
A    G -     C      ----  UCU     U   AUAUUUU  CAUU U AUUGU UCUCUU    CU   UUGUU AUU       U  |||| | ||||| ||||||    ||   ||||| |||       C  GUGA A UAAUA AGAGAA    GA   AACAA UAA       U A    G C     A      CUAU  -UU     U   AACAUCG |
Stem-loop sequence | ACAUUGUAUUGUCUCUCUUCUUCUUUGUUUAUUAUAUUUUUCUGCUACAAAAUUAACAAUUAGUAUCAAGAGAAAUAAUCAGAGUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006605659.2 |
|
2.5 | PREDICTED: Glycine max F-box/kelch-repeat protein At3g23880-like (LOC102669331), transcript variant X2, mRNA | F-box/kelch-repeat protein At3g23880-like(LOC102669331) | coding protein | psRNATarget | |||||||||
XM_006605658.2 |
|
2.5 | PREDICTED: Glycine max F-box/kelch-repeat protein At3g23880-like (LOC102669331), transcript variant X1, mRNA | F-box/kelch-repeat protein At3g23880-like(LOC102669331) | coding protein | psRNATarget | |||||||||
XM_006601486.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102665863 (LOC102665863), mRNA | uncharacterized LOC102665863(LOC102665863) | coding protein | psRNATarget |