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BaseInfo

ncRNA ID novel_gma_miR2430
Species Glycine max
Class miRNA
Genome position Chr1:17483685-17483768 [+]
Reference genome Glycine_max_v2.0
Source SRR1451657;SRR1451662;SRR1451612;SRR1451618
Length 20
Mature sequence(if miRNA) 1 - UUUUUGAAAUGGCUAUUUUU - 20
Stem-loop(if miRNA) ---U                       A G       UG   C
    UUUUGAAAUGGCUAUUUUUGCUU U GAAAAGG  UUU A
    ||||||||||||||||||||||| | |||||||  |||
    AAAGCUUUACUGAUAAAAACGAA A UUUUUCC  AAA G
GGAC                       - G       CU   A
Stem-loop sequence UUUUUGAAAUGGCUAUUUUUGCUUAUGGAAAAGGUGUUUCAGAAAAUCCCUUUUUGAAAGCAAAAAUAGUCAUUUCGAAACAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604723.2
ncRNA:20   UUUUUAUCGGUAAAGUUUUU   1
  *|||||||||||||=||||*
targets:1311   CAAAAUAGCCAUUUUAAAAU   1330

2.5 PREDICTED: Glycine max chloroplast stem-loop binding protein of 41 kDa b, chloroplastic (LOC100799721), transcript variant X2, mRNA chloroplast stem-loop binding protein of 41 kDa b, chloroplastic(LOC100799721) coding protein psRNATarget
BT094779.1
ncRNA:20   UUUUUAUCGGUAAAGUUUUU   1
  =|||=||||||||||*||||
targets:394   GAAAGUAGCCAUUUCCAAAA   413

2.5 Soybean clone JCVI-FLGm-6M7 unknown mRNA NA coding protein psRNATarget