ncRNA ID | novel_gma_miR2430 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:17483685-17483768 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451657;SRR1451662;SRR1451612;SRR1451618 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUUUGAAAUGGCUAUUUUU - 20 |
Stem-loop(if miRNA) |
---U                       A G       UG   C     UUUUGAAAUGGCUAUUUUUGCUU U GAAAAGG  UUU A     ||||||||||||||||||||||| | |||||||  |||     AAAGCUUUACUGAUAAAAACGAA A UUUUUCC  AAA G GGAC                       - G       CU   A |
Stem-loop sequence | UUUUUGAAAUGGCUAUUUUUGCUUAUGGAAAAGGUGUUUCAGAAAAUCCCUUUUUGAAAGCAAAAAUAGUCAUUUCGAAACAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006604723.2 |
|
2.5 | PREDICTED: Glycine max chloroplast stem-loop binding protein of 41 kDa b, chloroplastic (LOC100799721), transcript variant X2, mRNA | chloroplast stem-loop binding protein of 41 kDa b, chloroplastic(LOC100799721) | coding protein | psRNATarget | |||||||||
BT094779.1 |
|
2.5 | Soybean clone JCVI-FLGm-6M7 unknown mRNA | NA | coding protein | psRNATarget |