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BaseInfo

ncRNA ID	novel_gma_miR2429
Species	Glycine max
Class	miRNA
Genome position	Chr12:22913737-22913812 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451657
Length	22
Mature sequence(if miRNA)	55 - CAUUAGUUAAUUUGUAGAAGCU - 76
Stem-loop(if miRNA)	--            UG    A CU       AUAG   CU   CAUUAGUUAAUU  UAGA G  CUCUCAU    CUU  U   ||||||||||||  |||| |  |||||||    |||   GUAAUCGAUUAA  AUCU C  GAGAGUA    GAA  U AG            GU    A AG       ----   AA
Stem-loop sequence	CAUUAGUUAAUUUGUAGAAGCUCUCUCAUAUAGCUUCUUUAAAAGAUGAGAGGACAUCUAUGAAUUAGCUAAUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763080.1	ncRNA:22   UCGAAGAUGUUUAAUUGAUUAC   1   |||||||||||||||=|||||| targets:3632   AGCUUCUACAAAUUAGCUAAUG   3653 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:22   UCGAAGAUGUUUAAUUGAUUAC   1   |||||||||||||||=|||||| targets:3737   AGCUUCUACAAAUUAGCUAAUG   3758 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:22   UCGAAGAUGUUUAAUUGAUUAC   1   |||||||||||||||=|||||| targets:3868   AGCUUCUACAAAUUAGCUAAUG   3889 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:22   UCGAAGAUGUUUAAUUGAUUAC   1   |||||||||||||||=|||||| targets:3880   AGCUUCUACAAAUUAGCUAAUG   3901 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763075.1	ncRNA:22   UCGAAGAUGUUUAAUUGAUUAC   1   |||||||||||||||=|||||| targets:3969   AGCUUCUACAAAUUAGCUAAUG   3990 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_006603606.2	ncRNA:22   UCGAAGAUGUUUAAUUGAUUAC   1   ||=||||||||||||=|||||| targets:1529   AGUUUCUACAAAUUAGCUAAUG   1550 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_006603608.2	ncRNA:22   UCGAAGAUGUUUAAUUGAUUAC   1   ||=||||||||||||=|||||| targets:1539   AGUUUCUACAAAUUAGCUAAUG   1560 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_014773594.1	ncRNA:22   UCGAAGAUGUUUAAUUGAUUAC   1   |*=|||||||||||||=||||| targets:174   AAUUUCUACAAAUUAAUUAAUG   195 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC106798052 (LOC106798052), mRNA	uncharacterized LOC106798052(LOC106798052)	coding protein	psRNATarget
XM_003544213.3	ncRNA:22   UCGAAGAUGUUUAAUUGAUUAC   1   **|||||||*|||||||||||| targets:1312   UCCUUCUACCAAUUAACUAAUG   1333 Target Full Sequence	1.5	PREDICTED: Glycine max probable WRKY transcription factor 70 (LOC100796071), mRNA	probable WRKY transcription factor 70(LOC100796071)	coding protein	psRNATarget
XM_003525187.3	ncRNA:22   UC--GAAGAUGUUUAAUUGAUUAC   1   ||--|*|||||||||||=|||||| targets:1906   AGGACAUCUACAAAUUAGCUAAUG   1929 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA	uncharacterized LOC100801179(LOC100801179)	coding protein	psRNATarget