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BaseInfo

ncRNA ID novel_gma_miR2425
Species Glycine max
Class miRNA
Genome position Chr11:32248007-32248063 [-]
Reference genome Glycine_max_v2.0
Source SRR1451657
Length 24
Mature sequence(if miRNA) 1 - CGUCUUAGAAUGUGUUUCAGUGAC - 24
Stem-loop(if miRNA) -----UAC    UU                U
        AACA  CAUUCUAAGAUGGUUG U
        ||||  ||||||||||||||||
        UUGU  GUAAGAUUCUGCCAAU A
CAGUGACU    --                A
Stem-loop sequence UACAACAUUCAUUCUAAGAUGGUUGUUAAUAACCGUCUUAGAAUGUGUUUCAGUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CAGUGACUUUGUGUAAGAUUCUGC   1
  *|*|***|||||||||||||||||
targets:2502   UUAAAAAAAACACAUUCUAAGACG   2525

2.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_014771087.1
ncRNA:24   CAGUGACUUUGUGUAAGAUUCUGC   1
  *|*|***|||=|||||||||||||
targets:2598   UUAAAAAAAAUACAUUCUAAGACG   2621

3.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget