ncRNA ID | novel_gma_miR2422 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:40595383-40595485 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451655;SRR1295526 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUCUUUUGGACCAAUAAUAAUUAU - 24 |
Stem-loop(if miRNA) |
--    -      U     CAU     -GAA       - -U   U    A AG   GAUU UUGUUG GUUUA   GAAUU    AUAUAAU C  AUU AAUA G  A   |||| |||||| |||||   |||||    ||||||| |  ||| |||| |   UUAA AAUAAC CAGGU   CUUAA    UGUGUUA G  UAA UUAU C  A UA    U      -     UUU     AAUG       U UU   U    A UU |
Stem-loop sequence | GAUUUUGUUGUGUUUACAUGAAUUGAAAUAUAAUCUAUUUAAUAAGAGAAUUCAUAUUUAAUUUGUAUUGUGUGUAAAAUUCUUUUGGACCAAUAAUAAUUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003518304.3 |
|
2.5 | PREDICTED: Glycine max putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 (LOC100787339), mRNA | putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3(LOC100787339) | coding protein | psRNATarget | |||||||||
XM_014766533.1 |
|
2.5 | PREDICTED: Glycine max putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 (LOC100796246), mRNA | putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3(LOC100796246) | coding protein | psRNATarget |