Search result

BaseInfo

ncRNA ID novel_gma_miR2422
Species Glycine max
Class miRNA
Genome position Chr5:40595383-40595485 [-]
Reference genome Glycine_max_v2.0
Source SRR1451655;SRR1295526
Length 24
Mature sequence(if miRNA) 1 - UUCUUUUGGACCAAUAAUAAUUAU - 24
Stem-loop(if miRNA) --    -      U     CAU     -GAA       - -U   U    A AG
  GAUU UUGUUG GUUUA   GAAUU    AUAUAAU C  AUU AAUA G  A
  |||| |||||| |||||   |||||    ||||||| |  ||| |||| |
  UUAA AAUAAC CAGGU   CUUAA    UGUGUUA G  UAA UUAU C  A
UA    U      -     UUU     AAUG       U UU   U    A UU
Stem-loop sequence GAUUUUGUUGUGUUUACAUGAAUUGAAAUAUAAUCUAUUUAAUAAGAGAAUUCAUAUUUAAUUUGUAUUGUGUGUAAAAUUCUUUUGGACCAAUAAUAAUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518304.3
ncRNA:24   UAUU---AAUAAUAACCAGGUUUUCUU   1
  *|||---|||||*||||||||||||*|
targets:2256   CUAAAGUUUAUUUUUGGUCCAAAAGUA   2282

2.5 PREDICTED: Glycine max putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 (LOC100787339), mRNA putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3(LOC100787339) coding protein psRNATarget
XM_014766533.1
ncRNA:24   UAUU---AAUAAUAACCAGGUUUUCUU   1
  *|||---|||||*||||||||||||*|
targets:2305   CUAAAGUUUAUUUUUGGUCCAAAAGUA   2331

2.5 PREDICTED: Glycine max putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 (LOC100796246), mRNA putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3(LOC100796246) coding protein psRNATarget