ncRNA ID | novel_gma_miR2419 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:33277651-33277767 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451655 |
Length | 24 |
Mature sequence(if miRNA) | 94 - AUUAAAAUAUAAAUUUUAGGGACU - 117 |
Stem-loop(if miRNA) |
--                             A      A C     C  A      AU   UCCUUAAAAUUUAUAUUUUAAUUUUCAAA GGUUUC C UUAAA AA UUUAAC  U   ||||||||||||||||||||||||||||| |||||| | ||||| || ||||||  A   AGGGAUUUUAAAUAUAAAAUUAAGAGUUU CUAAAG G AAUUU UU GAAUUG  U UC                             A      A U     U  A      AU |
Stem-loop sequence | UCCUUAAAAUUUAUAUUUUAAUUUUCAAAAGGUUUCACCUUAAACAAAUUUAACAUUAUUAGUUAAGAUUUUUUAAUGAGAAAUCAUUUGAGAAUUAAAAUAUAAAUUUUAGGGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003521041.3 |
|
3.0 | PREDICTED: Glycine max GATA transcription factor 2-like (LOC100803262), mRNA | GATA transcription factor 2-like(LOC100803262) | coding protein | psRNATarget |