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BaseInfo

ncRNA ID novel_gma_miR2419
Species Glycine max
Class miRNA
Genome position Chr5:33277651-33277767 [+]
Reference genome Glycine_max_v2.0
Source SRR1451655
Length 24
Mature sequence(if miRNA) 94 - AUUAAAAUAUAAAUUUUAGGGACU - 117
Stem-loop(if miRNA) --                             A      A C     C  A      AU
  UCCUUAAAAUUUAUAUUUUAAUUUUCAAA GGUUUC C UUAAA AA UUUAAC  U
  ||||||||||||||||||||||||||||| |||||| | ||||| || ||||||  A
  AGGGAUUUUAAAUAUAAAAUUAAGAGUUU CUAAAG G AAUUU UU GAAUUG  U
UC                             A      A U     U  A      AU
Stem-loop sequence UCCUUAAAAUUUAUAUUUUAAUUUUCAAAAGGUUUCACCUUAAACAAAUUUAACAUUAUUAGUUAAGAUUUUUUAAUGAGAAAUCAUUUGAGAAUUAAAAUAUAAAUUUUAGGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003521041.3
ncRNA:24   UCAGGGAUUUUAAAUAUAAAAUUA   1
  **||==|=||*|||||||||||||
targets:895   UAUCUUUGAAUUUUAUAUUUUAAU   918

3.0 PREDICTED: Glycine max GATA transcription factor 2-like (LOC100803262), mRNA GATA transcription factor 2-like(LOC100803262) coding protein psRNATarget