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BaseInfo

ncRNA ID novel_gma_miR2417
Species Glycine max
Class miRNA
Genome position Chr5:27152157-27152337 [+]
Reference genome Glycine_max_v2.0
Source SRR1451655
Length 21
Mature sequence(if miRNA) 161 - CAACUAAGUUCGGAGGGAGCU - 181
Stem-loop(if miRNA) --  UU    U         -AAC  -  G    -  UU   ---G      G --A    AG  AA      A     -GAA     -     UU
  UU  CUCU GACUUGGUU    UG CU CUCU GU  AGU    CUUCUU U   UGUG  GU  UUCUUC GCAAG    UUUAG CUCCA  A
  ||  |||| |||||||||    || || |||| ||  |||    |||||| |   ||||  ||  |||||| |||||    ||||| |||||  G
  GA  GAGG UUGAAUCAA    AC GA GAGA CG  UCG    GAGGAG A   GCGC  CA  AAGAGG CGUUC    AAGUU GAGGU  A
UC  GG    C         CACA  A  A    A  UU   AAAA      G AAG    AA  --      A     AUCG     A     UU
Stem-loop sequence UUUUCUCUUGACUUGGUUAACUGCUGCUCUGUUUAGUGCUUCUUGUAUGUGAGGUAAUUCUUCAGCAAGGAAUUUAGCUCCAUUAGAUUUGGAGAUUGAAGCUACUUGCAGGAGAAACAACGCGGAAAGGAGGAGAAAAGCUUUGCAAGAGAAGACAACACAACUAAGUUCGGAGGGAGCU