ncRNA ID | novel_gma_miR2415 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:26568212-26568321 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451655 |
Length | 24 |
Mature sequence(if miRNA) | 87 - UUGAUGAGAAUUGAUUGAUAAACU - 110 |
Stem-loop(if miRNA) |
--      UUGG         UG  U  -     UUUCCUU    AUUAUA           UUUAUU    GAUUUUUAU  AA UA CAAUU       UAUG      AAUACAAUA   ||||||    |||||||||  || || |||||       ||||      ||||||||U   AAAUAG    UUAAGAGUA  UU GU GUUAA       AUGC      UUGUGUUAU UC      UUAG         GU  U  A     -----UC    ---AUC         |
Stem-loop sequence | UUUAUUUUGGGAUUUUUAUUGAAUUACAAUUUUUCCUUUAUGAUUAUAAAUACAAUAUUAUUGUGUUCUACGUACUAAUUGAUGUUUUGAUGAGAAUUGAUUGAUAAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768810.1 |
|
2.5 | PREDICTED: Glycine max vacuolar protein sorting-associated protein 8 homolog (LOC100785710), mRNA | vacuolar protein sorting-associated protein 8 homolog(LOC100785710) | coding protein | psRNATarget | |||||||||
XM_006583141.2 |
|
2.5 | PREDICTED: Glycine max vacuolar protein sorting-associated protein 8 homolog (LOC100780869), mRNA | vacuolar protein sorting-associated protein 8 homolog(LOC100780869) | coding protein | psRNATarget |