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BaseInfo

ncRNA ID	novel_gma_miR2412
Species	Glycine max
Class	miRNA
Genome position	Chr4:26327740-26327821 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451655
Length	20
Mature sequence(if miRNA)	63 - CCAUUAACUAAUUUGUAGAU - 82
Stem-loop(if miRNA)	--      A      U     UGUCC      C UU    U   CCAUUA CUAAUU GUAGA     UCUCAU U  CUUU A   |||||| |||||| |||||     |||||| |  ||||   GGUAAU GAUUAA CAUCU     AGAGUA A  GAAG G GA      C      U     UGAAA      U UU    A
Stem-loop sequence	CCAUUAACUAAUUUGUAGAUGUCCUCUCAUCUUUCUUUUAGAGAAGUUAUAUGAGAAAAGUUCUACUAAUUAGCUAAUGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006603606.2	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||||||||*|||||| targets:1532   UUCUACAAAUUAGCUAAUGG   1551 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X1, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_006603608.2	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||||||||*|||||| targets:1542   UUCUACAAAUUAGCUAAUGG   1561 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100500460 (LOC100500460), transcript variant X3, mRNA	uncharacterized LOC100500460(LOC100500460)	coding protein	psRNATarget
XM_014763080.1	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||||||||*|||||| targets:3635   UUCUACAAAUUAGCUAAUGG   3654 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X6, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763076.1	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||||||||*|||||| targets:3740   UUCUACAAAUUAGCUAAUGG   3759 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X2, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763077.1	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||||||||*|||||| targets:3871   UUCUACAAAUUAGCUAAUGG   3890 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X3, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763079.1	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||||||||*|||||| targets:3883   UUCUACAAAUUAGCUAAUGG   3902 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X5, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_014763075.1	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||||||||*|||||| targets:3972   UUCUACAAAUUAGCUAAUGG   3991 Target Full Sequence	1.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g49740-like (LOC100818021), transcript variant X1, mRNA	pentatricopeptide repeat-containing protein At3g49740-like(LOC100818021)	coding protein	psRNATarget
XM_003525187.3	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   |||||||||||||*|||||* targets:1911   AUCUACAAAUUAGCUAAUGA   1930 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100801179 (LOC100801179), mRNA	uncharacterized LOC100801179(LOC100801179)	coding protein	psRNATarget
BT095688.1	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||*|||||||||||* targets:1021   UUCUACAUAUUAGUUAAUGU   1040 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-19B16 unknown mRNA	NA	coding protein	psRNATarget
XM_003521505.3	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||*|||||||||||* targets:1059   UUCUACAUAUUAGUUAAUGU   1078 Target Full Sequence	2.5	PREDICTED: Glycine max dephospho-CoA kinase (LOC100782228), transcript variant X2, mRNA	dephospho-CoA kinase(LOC100782228)	coding protein	psRNATarget
XM_003521506.3	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *||||||*|||||||||||* targets:1089   UUCUACAUAUUAGUUAAUGU   1108 Target Full Sequence	2.5	PREDICTED: Glycine max dephospho-CoA kinase (LOC100782228), transcript variant X1, mRNA	dephospho-CoA kinase(LOC100782228)	coding protein	psRNATarget
XM_014773594.1	ncRNA:20   UAGAUGUUUAAUCAAUUACC   1   *|||||||||||*||||||* targets:177   UUCUACAAAUUAAUUAAUGU   196 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798052 (LOC106798052), mRNA	uncharacterized LOC106798052(LOC106798052)	coding protein	psRNATarget
XM_014762754.1	ncRNA:20   UAGAUGUUU-AAUCAAUUACC   1   |||||||||-||||||||||| targets:1232   AUCUACAAAAUUAGUUAAUGG   1252 Target Full Sequence	3.0	PREDICTED: Glycine max lipoprotein NlpI (LOC100809261), mRNA	lipoprotein NlpI(LOC100809261)	coding protein	psRNATarget