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BaseInfo

ncRNA ID novel_gma_miR2409
Species Glycine max
Class miRNA
Genome position Chr3:8308461-8308542 [+]
Reference genome Glycine_max_v2.0
Source SRR1451655
Length 20
Mature sequence(if miRNA) 1 - CUUUCUACGACGGUUAUUUU - 20
Stem-loop(if miRNA) --C      C             -      U     UAUCC
   UUUCUA GACGGUUAUUUUA UAACCG CUUAG     U
   |||||| ||||||||||||| |||||| |||||     U
   AAAGAU CUGCCAAUAAGAU AUUGGU GAAUC     U
CAU      U             U      C     UUUCA
Stem-loop sequence CUUUCUACGACGGUUAUUUUAUAACCGUCUUAGUAUCCUUUACUUUCUAAGCUGGUUAUUAGAAUAACCGUCUUAGAAAUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773514.1
ncRNA:20   UUUUAUUGGCAGCAUCUUUC   1
  *=*|||||||||||||||||
targets:2190   CGUAUAACCGUCGUAGAAAG   2209

2.0 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget
XM_014775518.1
ncRNA:20   UUUUAUUGGCAGCAUCUUUC   1
  *=||||||||||*|||||||
targets:739   UGAAUAACCGUCUUAGAAAG   758

2.5 PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA methylsterol monooxygenase 1-1-like(LOC100802435) coding protein psRNATarget