ncRNA ID | novel_gma_miR2409 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:8308461-8308542 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451655 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CUUUCUACGACGGUUAUUUU - 20 |
Stem-loop(if miRNA) |
--C      C             -      U     UAUCC    UUUCUA GACGGUUAUUUUA UAACCG CUUAG     U    |||||| ||||||||||||| |||||| |||||     U    AAAGAU CUGCCAAUAAGAU AUUGGU GAAUC     U CAU      U             U      C     UUUCA |
Stem-loop sequence | CUUUCUACGACGGUUAUUUUAUAACCGUCUUAGUAUCCUUUACUUUCUAAGCUGGUUAUUAGAAUAACCGUCUUAGAAAUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773514.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA | uncharacterized LOC106798042(LOC106798042) | coding protein | psRNATarget | |||||||||
XM_014775518.1 |
|
2.5 | PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA | methylsterol monooxygenase 1-1-like(LOC100802435) | coding protein | psRNATarget |