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BaseInfo

ncRNA ID novel_gma_miR2405
Species Glycine max
Class miRNA
Genome position Chr2:38724554-38724602 [+]
Reference genome Glycine_max_v2.0
Source SRR1451655;SRR1451621
Length 20
Mature sequence(if miRNA) 1 - AGUGGUAUGAUUCUCGCUUG - 20
Stem-loop(if miRNA) --         -A       UUGAU
  AGUGGUAUG  UUCUCGC     A
  |||||||||  |||||||
  UUAUCGUAU  AAGGGUG     A
AU         GA       UGAGU
Stem-loop sequence AGUGGUAUGAUUCUCGCUUGAUAAUGAGUGUGGGAAAGUAUGCUAUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770260.1
ncRNA:20   GUUCGCUCUUAGUAUGGUGA   1
  =|||||||||||||||||||
targets:199   UAAGCGAGAAUCAUACCACU   218

0.0 PREDICTED: Glycine max small heat shock protein, chloroplastic-like (LOC100798298), transcript variant X4, mRNA small heat shock protein, chloroplastic-like(LOC100798298) coding protein psRNATarget
XM_014777325.1
ncRNA:20   GUUCGCUCUUAGUAUGGUGA   1
  *|||||||||||||||||||
targets:2935   AAAGCGAGAAUCAUACCACU   2954

0.0 PREDICTED: Glycine max uncharacterized LOC100526875 (LOC100526875), transcript variant X1, mRNA uncharacterized LOC100526875(LOC100526875) coding protein psRNATarget