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BaseInfo

ncRNA ID novel_gma_miR2379
Species Glycine max
Class miRNA
Genome position Chr17:16667906-16667988 [-]
Reference genome Glycine_max_v2.0
Source SRR1451655
Length 22
Mature sequence(if miRNA) 1 - UAACAUCGGUUUUAUCAAAAAC - 22
Stem-loop(if miRNA) -UA     -              G    UC   UUAUUUA  A
   UUUGA AAAACUGAUGUUAA AAAG  ACA       CC U
   ||||| |||||||||||||| ||||  |||       || U
   AAACU UUUUGGCUACAAUU UUUU  UGU       GG A
CAA     A              G    UA   ----CAC  U
Stem-loop sequence UAUUUGAAAAACUGAUGUUAAGAAAGUCACAUUAUUUACCAUUAUGGCACUGUAUUUUUGUUAACAUCGGUUUUAUCAAAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006601416.2
ncRNA:22   CAAAAACUAUUUUGGCUACAAU   1
  ||||||||*|||||*|||||||
targets:363   GUUUUUGACAAAACGGAUGUUA   384

2.5 PREDICTED: Glycine max uncharacterized LOC102666752 (LOC102666752), transcript variant X1, mRNA uncharacterized LOC102666752(LOC102666752) coding protein psRNATarget