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BaseInfo

ncRNA ID novel_gma_miR2374
Species Glycine max
Class miRNA
Genome position Chr16:22615385-22615434 [+]
Reference genome Glycine_max_v2.0
Source SRR1451655
Length 21
Mature sequence(if miRNA) 30 - UGUAGAACAAAAUCAUGAUUU - 50
Stem-loop(if miRNA) --         CC           A
  AUCGUGAUU  GUUUUGCAACG A
  |||||||||  |||||||||||
  UAGUACUAA  CAAGAUGUUGU C
UU         AA           U
Stem-loop sequence AUCGUGAUUCCGUUUUGCAACGAACUUGUUGUAGAACAAAAUCAUGAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003529704.3
ncRNA:21   UUUAGUACUAAAACAAGAUGU   1
  |*=||||||||||*|||||||
targets:1358   AUGUCAUGAUUUUUUUCUACA   1378

2.5 PREDICTED: Glycine max flavonol synthase/flavanone 3-hydroxylase-like (LOC100799796), mRNA flavonol synthase/flavanone 3-hydroxylase-like(LOC100799796) coding protein psRNATarget
XM_006574936.2
ncRNA:21   UUUAGUACUAAAACAAGAUGU   1
  ***||||||||*|||||||||
targets:75   CUUUCAUGAUUCUGUUCUACA   95

2.5 PREDICTED: Glycine max transcription factor FAMA-like (LOC100793349), transcript variant X1, mRNA transcription factor FAMA-like(LOC100793349) coding protein psRNATarget
XM_006573225.2
ncRNA:21   UUUAGUACUAAAACAAGAUGU   1
  ***||||||||*|||||||||
targets:184   CUUUCAUGAUUCUGUUCUACA   204

2.5 PREDICTED: Glycine max transcription factor FAMA-like (LOC100813515), mRNA transcription factor FAMA-like(LOC100813515) coding protein psRNATarget