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BaseInfo

ncRNA ID novel_gma_miR2364
Species Glycine max
Class miRNA
Genome position Chr15:17070193-17070310 [-]
Reference genome Glycine_max_v2.0
Source SRR1451655
Length 22
Mature sequence(if miRNA) 1 - UUACAGAAUCAAUGUAGAAAAU - 22
Stem-loop(if miRNA) --         C       GCC           CAU  -   C                U
  UUUCUACAU GGUUUUG   AAAAUCGAUGU   AA UCA AUUCAACAUCGGUUUU C
  ||||||||| |||||||   |||||||||||   || ||| ||||||||||||||||
  AAAGAUGUA CUAAGAC   UUUUGGUUACA   UU AGU UAAGUUGUAGUCAAAA A
UA         A       -AU           ACU  C   A                A
Stem-loop sequence UUUCUACAUCGGUUUUGGCCAAAAUCGAUGUCAUAAUCACAUUCAACAUCGGUUUUUCAAAAAACUGAUGUUGAAUAUGACUUUCAACAUUGGUUUUUACAGAAUCAAUGUAGAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534255.3
ncRNA:22   UAAAAGAUGUAACUAAGACAUU   1
  =**|||||||||*|||||||||
targets:2082   GACUUCUACAUUAAUUCUGUAA   2103

1.5 PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 5-like (LOC100806057), mRNA DEAD-box ATP-dependent RNA helicase 5-like(LOC100806057) coding protein psRNATarget